RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-210	ENST00000515266	PFKFB3	Q16875	520 aa	Predicted RBP	4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	XRRA1	Q6P2D8	792 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	ACSM6	Q6P461	480 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	TFAP2D	Q7Z6R9	452 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	FAM186B	Q8IYM0	893 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	OR52L2P	Q8NGH6	319 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	DENND1A	Q8TEH3	1009 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	IPO4	Q8TEX9	1081 aa	Known RBP	4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	SCARB1	Q8WTV0	552 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	COQ8B	Q96D53	544 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	TNIP3	Q96KP6	325 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	ELAC2	Q9BQ52	826 aa	Known RBP	4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	GATA5	Q9BWX5	397 aa	Predicted RBP	4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	TM2D2	Q9BX73	214 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	SPRTN	Q9H040	489 aa	Predicted RBP	4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	NUAK2	Q9H093	628 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	VPS16	Q9H269	839 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	CDCP1	Q9H5V8	836 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	AGO4	Q9HCK5	861 aa	Known RBP	4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	MLXIPL	Q9NP71	852 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	SLC39A10	Q9ULF5	831 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	VPS4A	Q9UN37	437 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	CEP83	Q9Y592	693 aa		4.16	□□□□□ -1.74
MBD4-210	ENST00000515266	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	PRY	O14603	147 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	MOSPD3	O75425	235 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	SRGAP2B	P0DMP2	458 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	MATN1	P21941	496 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	MMP8	P22894	467 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	NDUFS1	P28331	727 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	HOXD9	P28356	352 aa	Predicted RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	TACR3	P29371	465 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	IDUA	P35475	653 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	HNRNPA0	Q13151	305 aa	Known RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	TRIP6	Q15654	476 aa	Known RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	CNGA3	Q16281	694 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	MSANTD2	Q6P1R3	559 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	KYAT3	Q6YP21	454 aa	Known RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	RASGRP3	Q8IV61	690 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	CCDC146	Q8IYE0	955 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	PRSS3P2	Q8NHM4	247 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	PIGO	Q8TEQ8	1089 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	WIPF2	Q8TF74	440 aa	Predicted RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	P2RY11	Q96G91	374 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	SIGLEC11	Q96RL6	698 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	NLRC4	Q9NPP4	1024 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	HELLS	Q9NRZ9	838 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	TUBA8	Q9NY65	449 aa	Predicted RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	IGSF9	Q9P2J2	1179 aa		4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.15	□□□□□ -1.75
MBD4-210	ENST00000515266	PIP5K1B	O14986	540 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	NPC1	O15118	1278 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	INPPL1	O15357	1258 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	TAF5L	O75529	589 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	NTSR2	O95665	410 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	GLP2R	O95838	553 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	ITGA5	P08648	1049 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	SERPINB3	P29508	390 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	PPM1A	P35813	382 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	MMP13	P45452	471 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	HSF1	Q00613	529 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	ELF2	Q15723	593 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	SYCP2L	Q5T4T6	812 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	ANO7	Q6IWH7	933 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	C16orf89	Q6UX73	402 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	DEF8	Q6ZN54	512 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	RFX6	Q8HWS3	928 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	GLMP	Q8WWB7	406 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	MUL1	Q969V5	352 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	ZNF48	Q96MX3	618 aa	Predicted RBP	4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	FCRL5	Q96RD9	977 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	EIF3C	Q99613	913 aa	Known RBP	4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	PAAF1	Q9BRP4	392 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	TTLL2	Q9BWV7	592 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	ZNF700	Q9H0M5	742 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	ARL8B	Q9NVJ2	186 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	SLC52A1	Q9NWF4	448 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	MTMR4	Q9NYA4	1195 aa		4.14	□□□□□ -1.75
MBD4-210	ENST00000515266	PNMA6E	A0A0J9YXQ4	647 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	C2CD4B	A6NLJ0	364 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	PPEF2	O14830	753 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	PLIN1	O60240	522 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	CNOT3	O75175	753 aa	Known RBP	4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	PLAU	P00749	431 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	ANXA6	P08133	673 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	IFIT2	P09913	472 aa	Known RBP	4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	CTSA	P10619	480 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	NPPB	P16860	134 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	HOXA7	P31268	230 aa	Predicted RBP	4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	PTGER1	P34995	402 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	HOXD12	P35452	270 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	IL6ST	P40189	918 aa	Predicted RBP	4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	VPS41	P49754	854 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	ZNF84	P51523	738 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	ZNF91	Q05481	1191 aa		4.13	□□□□□ -1.75
MBD4-210	ENST00000515266	CSHL1	Q14406	222 aa		4.13	□□□□□ -1.75

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