RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ACADVLP49748 655 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 MAP3K7CLP57077 242 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 CYP24A1Q07973 514 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 DNAJC3Q13217 504 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 TRPC3Q13507 836 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 CAMK2GQ13555 558 aaPredicted RBP11.51□□□□□ -0.57
DDX41-216ENST00000513562 HES3Q5TGS1 186 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 TMEM215Q68D42 235 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 FBXL19Q6PCT2 694 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 SERPINA13PQ6UXR4 307 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 GPRIN1Q7Z2K8 1008 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 SLC2A14Q8TDB8 520 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 FGF11Q92914 225 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 CCDC127Q96BQ5 260 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 BTBD1Q9H0C5 482 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 NMUR1Q9HB89 426 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDX41-216ENST00000513562 ZNF510Q9Y2H8 683 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 MYOFQ9NZM1 2061 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 A0A1W2PQH9 124 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 CBX4O00257 560 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 VILLO15195 856 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 FSBPO95073 299 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 LDOC1O95751 146 aaPredicted RBP11.5□□□□□ -0.57
DDX41-216ENST00000513562 RARGP13631 454 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 GJB2P29033 226 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 CHKAP35790 457 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 BCAT1P54687 386 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 CXADRP78310 365 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 ZBTB16Q05516 673 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 C10orf120Q5SQS8 335 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 BRAPQ7Z569 592 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 ADAT2Q7Z6V5 191 aaKnown RBP11.5□□□□□ -0.57
DDX41-216ENST00000513562 ACOT1Q86TX2 421 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 GATAD2AQ86YP4 633 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 SPACA3Q8IXA5 215 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 RDH13Q8NBN7 331 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 SAP25Q8TEE9 199 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 WBP1Q96G27 269 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 TMEM176AQ96HP8 235 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 CNDP2Q96KP4 475 aaKnown RBP11.5□□□□□ -0.57
DDX41-216ENST00000513562 ELF4Q99607 663 aaPredicted RBP11.5□□□□□ -0.57
DDX41-216ENST00000513562 CIPCQ9C0C6 399 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 SDCBP2Q9H190 292 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 FBXO2Q9UK22 296 aaPredicted RBP11.5□□□□□ -0.57
DDX41-216ENST00000513562 NUDT5Q9UKK9 219 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 CLEC4EQ9ULY5 219 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 MGAQ8IWI9 3026 aa11.5□□□□□ -0.57
DDX41-216ENST00000513562 MYO18AQ92614 2054 aaKnown RBP11.5□□□□□ -0.57
DDX41-216ENST00000513562 COL5A1P20908 1838 aaPredicted RBP11.49□□□□□ -0.57
DDX41-216ENST00000513562 HHLA1C9JL84 531 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 TGFB1I1O43294 461 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 TIMM44O43615 452 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 BRINP1O60477 761 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 IGHV4-34P06331 123 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 FAM200BP0CF97 657 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 TXLNAP40222 546 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 C21orf59P57076 290 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 RACK1P63244 317 aaKnown RBP11.49□□□□□ -0.57
DDX41-216ENST00000513562 SHBQ15464 509 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 BMT2Q1RMZ1 405 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 ZNF699Q32M78 642 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 SCARA5Q6ZMJ2 495 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 CCDC73Q6ZRK6 1079 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 TADA2BQ86TJ2 420 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 ERICH1Q86X53 443 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 ZNF276Q8N554 614 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 TSC1Q92574 1164 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 HPS3Q969F9 1004 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 ACE2Q9BYF1 805 aaPredicted RBP11.49□□□□□ -0.57
DDX41-216ENST00000513562 SLC2A11Q9BYW1 496 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 TMEM245Q9H330 911 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 CLMPQ9H6B4 373 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 FBRSQ9HAH7 460 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 SGK2Q9HBY8 427 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 PNPLA8Q9NP80 782 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 AGPAT3Q9NRZ7 376 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 HMGXB4Q9UGU5 601 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 AGO1Q9UL18 857 aaKnown RBP11.49□□□□□ -0.57
DDX41-216ENST00000513562 PCDHA5Q9Y5H7 936 aa11.49□□□□□ -0.57
DDX41-216ENST00000513562 EIF3DO15371 548 aaKnown RBP eCLIP11.48□□□□□ -0.57
DDX41-216ENST00000513562 CYBBP04839 570 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 CORO1AP31146 461 aaKnown RBP11.48□□□□□ -0.57
DDX41-216ENST00000513562 ACTN2P35609 894 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 PSEN1P49768 467 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 RPS14P62263 151 aaKnown RBP11.48□□□□□ -0.57
DDX41-216ENST00000513562 ARID5AQ03989 594 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 CCDC173Q0VFZ6 552 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 ILKQ13418 452 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 TBC1D25Q3MII6 688 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 TAF1BQ53T94 588 aaPredicted RBP11.48□□□□□ -0.57
DDX41-216ENST00000513562 ZNF667Q5HYK9 610 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 CLEC20AQ6ZU45 233 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
DDX41-216ENST00000513562 SCD5Q86SK9 330 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 CCDC65Q8IXS2 484 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 CACTIN-AS1Q8N1I8 211 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms