RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 NPC1O15118 1278 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 VILLO15195 856 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 ACADMP11310 421 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 CDK4P11802 303 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 ATP5C1P36542 298 aaKnown RBP11.79□□□□□ -0.52
RNF4-218ENST00000513284 RHDQ02161 417 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 WDR72Q3MJ13 1102 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 ARHGAP40Q5TG30 622 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 FAM35AQ86V20 835 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 FUKQ8N0W3 1084 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 CACTIN-AS1Q8N1I8 211 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 GPD1LQ8N335 351 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 KRI1Q8N9T8 703 aaKnown RBP11.79□□□□□ -0.52
RNF4-218ENST00000513284 ENGASEQ8NFI3 743 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 OR2T3Q8NH03 318 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 NOC3LQ8WTT2 800 aaKnown RBP11.79□□□□□ -0.52
RNF4-218ENST00000513284 NAF1Q96HR8 494 aaKnown RBP11.79□□□□□ -0.52
RNF4-218ENST00000513284 ELF4Q99607 663 aaPredicted RBP11.79□□□□□ -0.52
RNF4-218ENST00000513284 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
RNF4-218ENST00000513284 CYLDQ9NQC7 956 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 UBR5O95071 2799 aaPredicted RBP11.79□□□□□ -0.52
RNF4-218ENST00000513284 PTPN13Q12923 2485 aa11.79□□□□□ -0.52
RNF4-218ENST00000513284 DFNA5O60443 496 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 STC2O76061 302 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 PRPF6O94906 941 aaKnown RBP11.78□□□□□ -0.52
RNF4-218ENST00000513284 FSBPO95073 299 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 SEMA4FO95754 770 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 TNNC2P02585 160 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 EPHX1P07099 455 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 HOXD13P35453 343 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 ACTN2P35609 894 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 RPS14P62263 151 aaKnown RBP11.78□□□□□ -0.52
RNF4-218ENST00000513284 INSM1Q01101 510 aaPredicted RBP11.78□□□□□ -0.52
RNF4-218ENST00000513284 BNIP3Q12983 259 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 GPRIN1Q7Z2K8 1008 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 KANSL1Q7Z3B3 1105 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 DCBLD1Q8N8Z6 715 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 SNRNP27Q8WVK2 155 aaKnown RBP11.78□□□□□ -0.52
RNF4-218ENST00000513284 RFFLQ8WZ73 363 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 ELMO3Q96BJ8 720 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 NACA2Q9H009 215 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 XYLT2Q9H1B5 865 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 TMEM245Q9H330 911 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 CSNK1G1Q9HCP0 422 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.78□□□□□ -0.52
RNF4-218ENST00000513284 EXOC7Q9UPT5 735 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.78□□□□□ -0.52
RNF4-218ENST00000513284 UNC79Q9P2D8 2635 aa11.78□□□□□ -0.52
RNF4-218ENST00000513284 TEX15Q9BXT5 2789 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 PLXNA2O75051 1894 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.77□□□□□ -0.53
RNF4-218ENST00000513284 ZNF233A6NK53 670 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 HHLA1C9JL84 531 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 GCNT3O95395 438 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 ITGAVP06756 1048 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 GLDCP23378 1020 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 PLA2G4AP47712 749 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 COLEC12Q5KU26 742 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 SYCP3Q8IZU3 236 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 ZNF366Q8N895 744 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 SLC6A18Q96N87 628 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 ARID3AQ99856 593 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 SDCBP2Q9H190 292 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 LHX5Q9H2C1 402 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 DMAP1Q9NPF5 467 aaPredicted RBP11.77□□□□□ -0.53
RNF4-218ENST00000513284 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.77□□□□□ -0.53
RNF4-218ENST00000513284 SEL1LQ9UBV2 794 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 LSM7Q9UK45 103 aaKnown RBP11.77□□□□□ -0.53
RNF4-218ENST00000513284 SMC3Q9UQE7 1217 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 R3HCC1Q9Y3T6 440 aaKnown RBP11.77□□□□□ -0.53
RNF4-218ENST00000513284 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
RNF4-218ENST00000513284 A0A1W2PQH9 124 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 A0A1W2PR77 199 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 CYP26A1O43174 497 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 SLC28A2O43868 658 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 AP1G2O75843 785 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 GJB2P29033 226 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 CSRP3P50461 194 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 MYL6P60660 151 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 RACK1P63244 317 aaKnown RBP11.76□□□□□ -0.53
RNF4-218ENST00000513284 KCNJ12Q14500 433 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 INAVAQ3KP66 663 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 KLHDC10Q6PID8 442 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 SCD5Q86SK9 330 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 WDR49Q8IV35 697 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 ZNF248Q8NDW4 579 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 UCMAQ8WVF2 138 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 MED8Q96G25 268 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 LGMNQ99538 433 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 MED10Q9BTT4 135 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 BTBD1Q9H0C5 482 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 SMYD3Q9H7B4 428 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 PRSS16Q9NQE7 514 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 TLR8Q9NR97 1041 aaKnown RBP11.76□□□□□ -0.53
RNF4-218ENST00000513284 OLFML3Q9NRN5 406 aa11.76□□□□□ -0.53
RNF4-218ENST00000513284 NXF1Q9UBU9 619 aaKnown RBP11.76□□□□□ -0.53
RNF4-218ENST00000513284 CLCA2Q9UQC9 943 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms