RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 SRRDQ9UH36 339 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GGT7Q9UJ14 662 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CDYLQ9Y232 598 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 UBIAD1Q9Y5Z9 338 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PREX1Q8TCU6 1659 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 LRRC14BA6NHZ5 514 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 INPP4BO15327 924 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 USP2O75604 605 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 MPOP05164 745 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ZNF24P17028 368 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 EEF1DP29692 281 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 LSP1P33241 339 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GPR1P46091 355 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 MAD2L1Q13257 205 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 OTOP1Q7RTM1 612 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ATL1Q8WXF7 558 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 E2F7Q96AV8 911 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SERAC1Q96JX3 654 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 BBS2Q9BXC9 721 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 MRPL1Q9BYD6 325 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 POLR1EQ9GZS1 481 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 RAD21L1Q9H4I0 556 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 RGS18Q9NS28 235 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CDY1Q9Y6F8 540 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ZNF536O15090 1300 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 SPATA31C2B4DYI2 1134 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 GRM6O15303 877 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 EOMESO95936 686 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 ANXA5P08758 320 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 COMTP21964 271 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 GABRR2P28476 465 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 CHI3L1P36222 383 aaPredicted RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 CSE1LP55060 971 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 PFKPQ01813 784 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 SEC23AQ15436 765 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 SGO1Q5FBB7 561 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 ZDHHC20Q5W0Z9 365 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 AGMOQ6ZNB7 445 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 OTOP3Q7RTS5 596 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 RBM23Q86U06 439 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 ANKMY2Q8IV38 441 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 JADE3Q92613 823 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 TIFAQ96CG3 184 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 SERPINB12Q96P63 405 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 CAPN10Q9HC96 672 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 DDX4Q9NQI0 724 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 ZFP69BQ9UJL9 534 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 TSPAN16Q9UKR8 245 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.36□□□□□ -1.71
VCAN-209ENST00000513016 USP20Q9Y2K6 914 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 ZBTB14O43829 449 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 KLHL2O95198 593 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 RARGP13631 454 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 NR2C2P49116 596 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 MARSP56192 900 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 SLC7A5Q01650 507 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 ARID5BQ14865 1188 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 GSTA3Q16772 222 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 BEND6Q5SZJ8 279 aaPredicted RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 VSTM1Q6UX27 236 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 MOB2Q70IA6 237 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 KSR1Q8IVT5 923 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 CCDC60Q8IWA6 550 aaPredicted RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 TOP6BLQ8N6T0 577 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 LRRC52Q8N7C0 313 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 TRIML2Q8N7C3 387 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 C2orf15Q8WU43 125 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 VPS33AQ96AX1 596 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 SH3GL1Q99961 368 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 CNPPD1Q9BV87 410 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 PHPT1Q9NRX4 125 aaPredicted RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 FAF1Q9UNN5 650 aaPredicted RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 C2CD2Q9Y426 696 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 INSL6Q9Y581 213 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 CAPN7Q9Y6W3 813 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 PIK3CDO00329 1044 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 ACSL4O60488 711 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 AVILO75366 819 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 PCNAP12004 261 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 RTP1P59025 263 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 SNX30Q5VWJ9 437 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 ANO5Q75V66 913 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 TRIM69Q86WT6 500 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 FAM131BQ86XD5 332 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 GPR135Q8IZ08 494 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 DSELQ8IZU8 1212 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 TACO1Q9BSH4 297 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 DDX47Q9H0S4 455 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 FBXL5Q9UKA1 691 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 CDH16O75309 829 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 GLRA3O75311 464 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 FTH1P02794 183 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 CNPP09543 421 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 ATP6V1C1P21283 382 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 ACAT1P24752 427 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 SERPINB8P50452 374 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 CCR3P51677 355 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 ADIGQ0VDE8 80 aa4.36□□□□□ -1.71
VCAN-209ENST00000513016 DDX39BQ13838 428 aaKnown RBP4.36□□□□□ -1.71
VCAN-209ENST00000513016 ZNHIT3Q15649 155 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms