RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ZNF513Q8N8E2 541 aaPredicted RBP13.87□□□□□ -0.19
RNF4-215ENST00000511843 MDGA1Q8NFP4 955 aa13.87□□□□□ -0.19
RNF4-215ENST00000511843 ADAM32Q8TC27 787 aa13.87□□□□□ -0.19
RNF4-215ENST00000511843 ENOX1Q8TC92 643 aaKnown RBP13.87□□□□□ -0.19
RNF4-215ENST00000511843 IRGQQ8WZA9 623 aa13.87□□□□□ -0.19
RNF4-215ENST00000511843 XPO6Q96QU8 1125 aaKnown RBP13.87□□□□□ -0.19
RNF4-215ENST00000511843 SLC4A5Q9BY07 1137 aa13.87□□□□□ -0.19
RNF4-215ENST00000511843 DCLK3Q9C098 648 aa13.87□□□□□ -0.19
RNF4-215ENST00000511843 TMEM63CQ9P1W3 806 aa13.87□□□□□ -0.19
RNF4-215ENST00000511843 GMEB2Q9UKD1 530 aa13.87□□□□□ -0.19
RNF4-215ENST00000511843 NAALADL1Q9UQQ1 740 aa13.87□□□□□ -0.19
RNF4-215ENST00000511843 TNRC6BQ9UPQ9 1833 aaKnown RBP13.87□□□□□ -0.19
RNF4-215ENST00000511843 GOLGA6L7A0A1B0GV03 622 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 FBXO21O94952 628 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 PENKP01210 267 aaPredicted RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 NCAM1P13591 858 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 CHKAP35790 457 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 RPL34P49207 117 aaKnown RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 HARS2P49590 506 aaKnown RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 SGSHP51688 502 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 PITX1P78337 314 aaPredicted RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 PDCLQ13371 301 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 DRAP1Q14919 205 aaPredicted RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 KRT31Q15323 416 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 TAF5Q15542 800 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 CCDC6Q16204 474 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 STX1AQ16623 288 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 CCDC183Q5T5S1 534 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 KLHDC7AQ5VTJ3 777 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 LAIR1Q6GTX8 287 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 RFWD3Q6PCD5 774 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 C1orf131Q8NDD1 294 aaKnown RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 CCDC26Q8TAB7 109 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 DQX1Q8TE96 717 aaKnown RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 HMGB4Q8WW32 186 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 GOLGA1Q92805 767 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 FAM81BQ96LP2 452 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 CPXM1Q96SM3 734 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 ZNF510Q9Y2H8 683 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 HBS1LQ9Y450 684 aaKnown RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 DCHS1Q96JQ0 3298 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 SPTBN4Q9H254 2564 aa13.86□□□□□ -0.19
RNF4-215ENST00000511843 MUC22E2RYF6 1773 aaPredicted RBP13.86□□□□□ -0.19
RNF4-215ENST00000511843 CCDC163A0A0D9SF12 145 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 TCRBV21S2A2A0A5A6 115 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 WASH3PC4AMC7 463 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 MBD3O95983 291 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 IGLV3-27P01718 113 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 EEF1GP26641 437 aaKnown RBP13.85□□□□□ -0.19
RNF4-215ENST00000511843 CNR2P34972 360 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 ACADSBP45954 432 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 TBX4P57082 545 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 PTK2Q05397 1052 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 GEN1Q17RS7 908 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 CT47A1Q5JQC4 288 aaPredicted RBP13.85□□□□□ -0.19
RNF4-215ENST00000511843 TAC4Q86UU9 113 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 FAM217AQ8IXS0 508 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 FAM71AQ8IYT1 594 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 CPXM2Q8N436 756 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 FRMD1Q8N878 549 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 DDI1Q8WTU0 396 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 RLN3Q8WXF3 142 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 USP18Q9UMW8 372 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 LAMA1P25391 3075 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 CKAP5Q14008 2032 aa13.85□□□□□ -0.19
RNF4-215ENST00000511843 EPHB6O15197 1021 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 GRAP2O75791 330 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 ERBB2P04626 1255 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 CYBBP04839 570 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 HOXB2P14652 356 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 UCHL3P15374 230 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 BCKDHBP21953 392 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 TGM1P22735 817 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 HOXD9P28356 352 aaPredicted RBP13.84□□□□□ -0.19
RNF4-215ENST00000511843 SLC6A4P31645 630 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 MEA1Q16626 185 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 EOGTQ5NDL2 527 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 TAF3Q5VWG9 929 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 KIAA1211LQ6NV74 962 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 TMEM110Q86TL2 294 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 RASSF3Q86WH2 238 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 STK32AQ8WU08 396 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 SORCS1Q8WY21 1168 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 MYEOVQ96EZ4 313 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 FCRL2Q96LA5 508 aaPredicted RBP13.84□□□□□ -0.19
RNF4-215ENST00000511843 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
RNF4-215ENST00000511843 DUSP15Q9H1R2 295 aaPredicted RBP13.84□□□□□ -0.19
RNF4-215ENST00000511843 GANQ9H2C0 597 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 CACNA2D2Q9NY47 1150 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
RNF4-215ENST00000511843 EBF1Q9UH73 591 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 FBXO10Q9UK96 956 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 PCDHGC3Q9UN70 934 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 RAD54BQ9Y620 910 aa13.84□□□□□ -0.19
RNF4-215ENST00000511843 NYNRINQ9P2P1 1898 aaKnown RBP13.84□□□□□ -0.19
RNF4-215ENST00000511843 SYNJ2BP-COX16A0A087WUM0 186 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 GFRA2O00451 464 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 MOCS2O96007 188 aaPredicted RBP13.83□□□□□ -0.2
RNF4-215ENST00000511843 RETP07949 1114 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms