RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 PPFIA2O75334 1257 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 JTBO76095 146 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 PTMAP06454 111 aaKnown RBP4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 ELFN1P0C7U0 828 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 TMIGD3P0DMS9 266 aaPredicted RBP4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 GYS1P13807 737 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 KLRK1P26718 216 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 IGHMBP2P38935 993 aaKnown RBP4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 CACNA2D1P54289 1103 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 FOXI1Q12951 378 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 MTAPQ13126 283 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 DNASE1L3Q13609 305 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 AASDHQ4L235 1098 aaPredicted RBP4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 KIRREL2Q6UWL6 708 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 VSTM1Q6UX27 236 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 DPY19L3Q6ZPD9 716 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 C12orf76Q8N812 135 aaPredicted RBP4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 SPPL3Q8TCT6 385 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 THAP4Q8WY91 577 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 GOLGA1Q92805 767 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 CCDC17Q96LX7 622 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 FYTTD1Q96QD9 318 aaKnown RBP4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 FOXJ2Q9P0K8 574 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 TLK1Q9UKI8 766 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 ST3GAL5Q9UNP4 418 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 CNTN6Q9UQ52 1028 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 PCDHB7Q9Y5E2 793 aa4.48□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3DA0A087WVF3 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3IA0A087WXS9 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3EA0A087X179 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3KA0A087X1G2 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3BA6NDS4 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3FA6NER0 549 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3LB9A6J9 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 BTBD19C9JJ37 291 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 UBE2Q2LH0YL09 131 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 ZNF500O60304 480 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 CBFA2T3O75081 653 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 PPP6R2O75170 966 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 CER1O95813 267 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3HP0C7X1 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 JUPP14923 745 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 VEGFAP15692 232 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 GPD1P21695 349 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 DUSP1P28562 367 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 SERPINA4P29622 427 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 MAPK9P45984 424 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 PCP4P48539 62 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 SIM1P81133 766 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 CFHR3Q02985 330 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 SF3A3Q12874 501 aaKnown RBP eCLIP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 LMAN2Q12907 356 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 EFR3AQ14156 821 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 BTBD16Q32M84 506 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 GLE1Q53GS7 698 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 FBXO47Q5MNV8 452 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TSTD2Q5T7W7 516 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 FAM90A2PQ658T7 463 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 ANKRD40Q6AI12 368 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3GQ6DHY5 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3CQ6IPX1 549 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 ZNF280DQ6N043 979 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 JMJD6Q6NYC1 403 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 MSANTD2Q6P1R3 559 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 WDR93Q6P2C0 686 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 ACSM6Q6P461 480 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 SERPINA13PQ6UXR4 307 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 PIK3AP1Q6ZUJ8 805 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 ZNF627Q7L945 461 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 LDLRAD3Q86YD5 345 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 RASAL3Q86YV0 1011 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 FTSJ3Q8IY81 847 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 C16orf71Q8IYS4 520 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TBC1D3Q8IZP1 549 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TERB1Q8NA31 727 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 SLC22A17Q8WUG5 538 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 GLMPQ8WWB7 406 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 WDYHV1Q96HA8 205 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 UROC1Q96N76 676 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 LENG8Q96PV6 779 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 SNX18Q96RF0 628 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 TIMP4Q99727 224 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 PYM1Q9BRP8 204 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 RNF26Q9BY78 433 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 CIPCQ9C0C6 399 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 NOD2Q9HC29 1040 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 FSCN3Q9NQT6 498 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 LPAR3Q9UBY5 353 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 SRP68Q9UHB9 627 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 PCDHGB3Q9Y5G1 929 aa4.47□□□□□ -1.69
CALCOCO2-220ENST00000511816 GXYLT2A0PJZ3 443 aa4.46□□□□□ -1.7
CALCOCO2-220ENST00000511816 C3orf70A6NLC5 250 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-220ENST00000511816 DHHO43323 396 aa4.46□□□□□ -1.7
CALCOCO2-220ENST00000511816 ANP32CO43423 234 aa4.46□□□□□ -1.7
CALCOCO2-220ENST00000511816 SUV39H1O43463 412 aa4.46□□□□□ -1.7
CALCOCO2-220ENST00000511816 CA12O43570 354 aa4.46□□□□□ -1.7
CALCOCO2-220ENST00000511816 EXOC3O60645 756 aa4.46□□□□□ -1.7
CALCOCO2-220ENST00000511816 GCATO75600 419 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms