RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SH3BP4Q9P0V3 963 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 SLC17A6Q9P2U8 582 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 SRP68Q9UHB9 627 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 TLK1Q9UKI8 766 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 NFU1Q9UMS0 254 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 MGST3O14880 152 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 CTIFO43310 598 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 DHHO43323 396 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 GCATO75600 419 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 TJP3O95049 919 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 HSD3B1P14060 373 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 IGHMBP2P38935 993 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 AARSP49588 968 aaKnown RBP eCLIP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 PNLIPRP1P54315 467 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 CYP4F2P78329 520 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 DNASE1L3Q13609 305 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 CUL4BQ13620 913 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 TAF12Q16514 161 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 ADCK5Q3MIX3 580 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 RNASE12Q5GAN4 147 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM90A2PQ658T7 463 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 CEP85Q6P2H3 762 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 AMIGO2Q86SJ2 522 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 MOGAT3Q86VF5 341 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 ARHGEF25Q86VW2 580 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 FTSJ3Q8IY81 847 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 C12orf76Q8N812 135 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 OR6Y1Q8NGX8 325 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 CSGALNACT1Q8TDX6 532 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D5Q92609 795 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 GCC1Q96CN9 775 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 CHFRQ96EP1 664 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAR2Q96K12 515 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 MECRQ9BV79 373 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 VPS45Q9NRW7 570 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 LIN7CQ9NUP9 197 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 DAPP1Q9UN19 280 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 C19orf53Q9UNZ5 99 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 CNTN6Q9UQ52 1028 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 GPR52Q9Y2T5 361 aa3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 UBE2J1Q9Y385 318 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3DA0A087WVF3 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3IA0A087WXS9 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3EA0A087X179 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3KA0A087X1G2 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 CCDC187A0A096LP49 1063 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3BA6NDS4 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM90A18PA6NE21 464 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3FA6NER0 549 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM90A16PA6NEW6 464 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM90A9PA6NNJ1 464 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM90A5PA8MXJ8 464 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3LB9A6J9 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 H0Y3Z8 333 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 M0QYT0 321 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 PRAMEF2O60811 474 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 LARGE1O95461 756 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 SLC3A2P08195 630 aaKnown RBP3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM90A15PP0C7V4 464 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM90A14PP0C7W9 464 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3HP0C7X1 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 PEPDP12955 493 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 RXRAP19793 462 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 CST5P28325 142 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 SERPINA4P29622 427 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 GALNSP34059 522 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 ADD2P35612 726 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 JAK3P52333 1124 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 CACNA2D1P54289 1103 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 PRKAA2P54646 552 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 MFSD13AQ14CX5 517 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3GQ6DHY5 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3CQ6IPX1 549 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TMEM65Q6PI78 240 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 OLFML1Q6UWY5 402 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 SYNE3Q6ZMZ3 975 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 C2CD5Q86YS7 1000 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBC1D3Q8IZP1 549 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 GPR150Q8NGU9 434 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 MAFAQ8NHW3 353 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 RILPL2Q969X0 211 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 KLK15Q9H2R5 256 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 RRN3Q9NYV6 651 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 NDUFAF4Q9P032 175 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 BAG5Q9UL15 447 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 RAB21Q9UL25 225 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 TRPC5Q9UL62 973 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 ENTPD2Q9Y5L3 495 aa3.88□□□□□ -1.79
TRAPPC11-207ENST00000511409 POLR2AP24928 1970 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 SMIM22K7EJ46 135 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 M0QZQ0 153 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 EIF3FO00303 357 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 FYB1O15117 783 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 JTBO76095 146 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 MT-CO3P00414 261 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 C1RP00736 705 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 GPD1P21695 349 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 MATN1P21941 496 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms