RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 ENPP2Q13822 863 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 EXOC3L4Q17RC7 722 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 RSPO4Q2I0M5 234 aaPredicted RBP12.68□□□□□ -0.38
CLDND1-223ENST00000511081 DPCR1Q3MIW9 517 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 C10orf76Q5T2E6 689 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 RNF43Q68DV7 783 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 TOGARAM2Q6ZUX3 1019 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 RSRC2Q7L4I2 434 aaKnown RBP12.68□□□□□ -0.38
CLDND1-223ENST00000511081 TMEM110Q86TL2 294 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 C11orf74Q86VG3 221 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 DENND1CQ8IV53 801 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 SIX6OS1Q8N1H7 587 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 ZNF513Q8N8E2 541 aaPredicted RBP12.68□□□□□ -0.38
CLDND1-223ENST00000511081 MDGA1Q8NFP4 955 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 RNF139Q8WU17 664 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 SHC3Q92529 594 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 PIWIL1Q96J94 861 aaKnown RBP12.68□□□□□ -0.38
CLDND1-223ENST00000511081 GABRG3Q99928 467 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 CRACR2AQ9BSW2 395 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
CLDND1-223ENST00000511081 POLMQ9NP87 494 aaPredicted RBP12.68□□□□□ -0.38
CLDND1-223ENST00000511081 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 APEX2Q9UBZ4 518 aa12.68□□□□□ -0.38
CLDND1-223ENST00000511081 PLXND1Q9Y4D7 1925 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 M0QYV0 167 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 DCLK1O15075 740 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 RHOBTB1O94844 696 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 LTFP02788 710 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 HMBSP08397 361 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 ACADSBP45954 432 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 HARS2P49590 506 aaKnown RBP12.67□□□□□ -0.38
CLDND1-223ENST00000511081 RING1Q06587 406 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 MAN2A1Q16706 1144 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 MIIPQ5JXC2 388 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 ADGRF1Q5T601 910 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 EGFLAMQ63HQ2 1017 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 ANO7Q6IWH7 933 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 PRR23CQ6ZRP0 262 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 RBM43Q6ZSC3 357 aaKnown RBP12.67□□□□□ -0.38
CLDND1-223ENST00000511081 SCUBE3Q8IX30 993 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 EDEM1Q92611 657 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 NUP62CLQ9H1M0 184 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 ARRDC1-AS1Q9H2J1 176 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 ZDHHC4Q9NPG8 344 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 PLK2Q9NYY3 685 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 SFMBT1Q9UHJ3 866 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 USP18Q9UMW8 372 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 GON4LQ3T8J9 2241 aa12.67□□□□□ -0.38
CLDND1-223ENST00000511081 NPC1O15118 1278 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 MED7O43513 233 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 ATXN1P54253 815 aaKnown RBP12.66□□□□□ -0.38
CLDND1-223ENST00000511081 ZNF445P59923 1031 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 EIF4EBP2Q13542 120 aaPredicted RBP12.66□□□□□ -0.38
CLDND1-223ENST00000511081 ELF2Q15723 593 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 MAP7D1Q3KQU3 841 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 MPPE1Q53F39 396 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 PMS2CLQ68D20 193 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 DENND1BQ6P3S1 775 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 KIAA0907Q7Z7F0 614 aaPredicted RBP12.66□□□□□ -0.38
CLDND1-223ENST00000511081 WDTC1Q8N5D0 677 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 CLEC4CQ8WTT0 213 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 SLC39A13Q96H72 371 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 ACOX2Q99424 681 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 TPSD1Q9BZJ3 242 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 CYTH4Q9UIA0 394 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 CLEC4EQ9ULY5 219 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 PCDHGC3Q9UN70 934 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.66□□□□□ -0.38
CLDND1-223ENST00000511081 THADAQ6YHU6 1953 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 SPTBN2O15020 2390 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 NUP205Q92621 2012 aa12.66□□□□□ -0.38
CLDND1-223ENST00000511081 NCOR2Q9Y618 2525 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 BCLAF3A2AJT9 711 aaKnown RBP12.65□□□□□ -0.38
CLDND1-223ENST00000511081 TM4SF5O14894 197 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 PAPSS1O43252 624 aaPredicted RBP12.65□□□□□ -0.38
CLDND1-223ENST00000511081 SART1O43290 800 aaKnown RBP12.65□□□□□ -0.38
CLDND1-223ENST00000511081 TIMM44O43615 452 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 LETM1O95202 739 aaPredicted RBP12.65□□□□□ -0.38
CLDND1-223ENST00000511081 CYBBP04839 570 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 KRT5P13647 590 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 GABRG2P18507 467 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 GNA15P30679 374 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 MTIF2P46199 727 aaKnown RBP12.65□□□□□ -0.38
CLDND1-223ENST00000511081 LIMK1P53667 647 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 APBA1Q02410 837 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 NNTQ13423 1086 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 BYSLQ13895 437 aaKnown RBP12.65□□□□□ -0.38
CLDND1-223ENST00000511081 GEN1Q17RS7 908 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 VWA3BQ502W6 1294 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 MPP7Q5T2T1 576 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 FAM114A1Q8IWE2 563 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 UNC45BQ8IWX7 931 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 NETO1Q8TDF5 533 aa12.65□□□□□ -0.38
CLDND1-223ENST00000511081 BHMTQ93088 406 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms