RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 IDO1P14902 403 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 LACTB2Q53H82 288 aaPredicted RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 AGAP11Q8TF27 550 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 RIN2Q8WYP3 895 aaPredicted RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 COX4I2Q96KJ9 171 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 FLT1P17948 1338 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CHADO15335 359 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 SNX3O60493 162 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CASP12Q6UXS9 341 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 EPB41L4BQ9H329 900 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 PCDHGC5Q9Y5F6 944 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 E9PCH4 1651 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CYP2D6P10635 497 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 ERCC2P18074 760 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 SCNN1DP51172 638 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 PTPN21Q16825 1174 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 DRAXINQ8NBI3 349 aaPredicted RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 MOSPD2Q8NHP6 518 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 LATS2Q9NRM7 1088 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 DNAJC16Q9Y2G8 782 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 FADS3Q9Y5Q0 445 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 RPS6KL1Q9Y6S9 549 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 BCORL1Q5H9F3 1711 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CCDC81Q6ZN84 652 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 ARMCX6Q7L4S7 300 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 PEX5LQ8IYB4 626 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CKAP2Q8WWK9 683 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 NSMCE2Q96MF7 247 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 PCDH18Q9HCL0 1135 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 ADPRHL2Q9NX46 363 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 UBE2QL1A1L167 161 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CSE1LP55060 971 aaKnown RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 RPS6P62753 249 aaKnown RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 GPC6Q9Y625 555 aaPredicted RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 ARID1BQ8NFD5 2236 aaPredicted RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 CARNS1A5YM72 827 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CASP5P51878 434 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 NDUFAF6Q330K2 333 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 ANKMY2Q8IV38 441 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 REEP2Q9BRK0 252 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 SLITRK2Q9H156 845 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 FAM217BQ9NTX9 383 aaPredicted RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 ASAP1Q9ULH1 1129 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 RNF112Q9ULX5 631 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 A0A087X1B8 175 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 NFYCQ13952 458 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 SPANXN3Q5MJ09 141 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 TMEM110Q86TL2 294 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CLEC11AQ9Y240 323 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 ZFYVE16Q7Z3T8 1539 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 GSG1L2A8MUP6 293 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 MYL12BO14950 172 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CRTAMO95727 393 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 TCN1P20061 433 aaPredicted RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 FBXO36Q8NEA4 188 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 RAB2BQ8WUD1 216 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 MYLPFQ96A32 169 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 PNPLA8Q9NP80 782 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 FKBP14Q9NWM8 211 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 TSPOAP1O95153 1857 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 RGSL1A5PLK6 1076 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 ASS1P00966 412 aaKnown RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 C7P10643 843 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 BNIPLQ7Z465 357 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 CDC42EP4Q9H3Q1 356 aaKnown RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 SPAG4Q9NPE6 437 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 IFRD1O00458 451 aaPredicted RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 PRPF4O43172 522 aaKnown RBP eCLIP8.58□□□□□ -1.04
HTT-208ENST00000510626 HARS2P49590 506 aaKnown RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 SULT1E1P49888 294 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 UBE2SQ16763 222 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 INTS11Q5TA45 600 aaKnown RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 ZCCHC8Q6NZY4 707 aaKnown RBP8.58□□□□□ -1.04
HTT-208ENST00000510626 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.58□□□□□ -1.04
HTT-208ENST00000510626 HDHD2Q9H0R4 259 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 ZC3H13Q5T200 1668 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 RBM47A0AV96 593 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 ATG16L2Q8NAA4 619 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 HELQQ8TDG4 1101 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.57□□□□□ -1.04
HTT-208ENST00000510626 SPATA2Q9UM82 520 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 UBXN8O00124 270 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 FARP2O94887 1054 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 RPL3P39023 403 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 CREG2Q8IUH2 290 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 RBM12BQ8IXT5 1001 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 SRBD1Q8N5C6 995 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 TRHDEQ9UKU6 1024 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 MYMKA6NI61 221 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 BBIP1A8MTZ0 92 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 C2CD2LO14523 706 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 SEMA3DO95025 777 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 ATP6V1B2P21281 511 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 TNK2Q07912 1038 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 KATNAL2Q8IYT4 538 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 MKS1Q9NXB0 559 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 SPEF2Q9C093 1822 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 PIPSLA2A3N6 862 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 RPL14P50914 215 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms