RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 CASP5P51878 434 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 SNRPFP62306 86 aaKnown RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 ASIC1P78348 528 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 BFSP1Q12934 665 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 MTAPQ13126 283 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 MAPRE1Q15691 268 aaKnown RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 NKPD1Q17RQ9 610 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 DGKKQ5KSL6 1271 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 STXBP5Q5T5C0 1151 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 C4orf50Q6ZRC1 276 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 GAREM2Q75VX8 874 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 DPH6Q7L8W6 267 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 HS2ST1Q7LGA3 356 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 ADGRF2Q8IZF7 708 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 MAML2Q8IZL2 1156 aaPredicted RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 PDCL2Q8N4E4 241 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 CELF5Q8N6W0 485 aaKnown RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 ZBTB44Q8NCP5 570 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 LINC00301Q8NCQ3 95 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 RIN3Q8TB24 985 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 BPIFB1Q8TDL5 484 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 MRPS31Q92665 395 aaKnown RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 FUBP3Q96I24 572 aaKnown RBP eCLIP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 TMEM209Q96SK2 561 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 CBWD1Q9BRT8 395 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 TRIM9Q9C026 710 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 MTMR12Q9C0I1 747 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 MIR1-1HGQ9H1L0 117 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 EPC1Q9H2F5 836 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 TNKS2Q9H2K2 1166 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 PRDM7Q9NQW5 492 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 MBNL3Q9NUK0 354 aaKnown RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 KBTBD4Q9NVX7 518 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 GDAP2Q9NXN4 497 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 DDX43Q9NXZ2 648 aaKnown RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 EHD2Q9NZN4 543 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 AGAP1Q9UPQ3 857 aa7.95□□□□□ -1.14
CCSER1-208ENST00000509109 SMG5Q9UPR3 1016 aaKnown RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 HELZP42694 1942 aaKnown RBP7.95□□□□□ -1.14
CCSER1-208ENST00000509109 SPECC1L-ADORA2AF8WAN1 911 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 GFRA2O00451 464 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 PRAMEF12O95522 483 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CCNE1P24864 410 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CXCL12P48061 93 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 ME1P48163 572 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CYP4F8P98187 520 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 LMNB2Q03252 620 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 ITPRIPL2Q3MIP1 535 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CFAP221Q4G0U5 840 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 FAM26FQ5R3K3 315 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 PRAMEF13Q5VWM6 474 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 ATL3Q6DD88 541 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CC2D1AQ6P1N0 951 aaPredicted RBP7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CNNM4Q6P4Q7 775 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 SPATA2LQ8IUW3 424 aaPredicted RBP7.94□□□□□ -1.14
CCSER1-208ENST00000509109 WDR49Q8IV35 697 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 HID1Q8IV36 788 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 SYNPOQ8N3V7 929 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 SPEM1Q8N4L4 309 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CSGALNACT2Q8N6G5 542 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 FSIP1Q8NA03 581 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 GOLGA5Q8TBA6 731 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 NELL1Q92832 810 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 SNX21Q969T3 373 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 DHX58Q96C10 678 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 TRMT2BQ96GJ1 504 aaKnown RBP7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CEP295NLQ96MC4 621 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 FNBP1Q96RU3 617 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 DPH2Q9BQC3 489 aaPredicted RBP7.94□□□□□ -1.14
CCSER1-208ENST00000509109 PANK2Q9BZ23 570 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 IKZF4Q9H2S9 585 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 LMAN1LQ9HAT1 526 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 PDE11AQ9HCR9 933 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 HSPBP1Q9NZL4 362 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CGNQ9P2M7 1197 aaKnown RBP7.94□□□□□ -1.14
CCSER1-208ENST00000509109 GMEB2Q9UKD1 530 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 CFAP45Q9UL16 551 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 L1RE1Q9UN81 338 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 SNX9Q9Y5X1 595 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 GPR179Q6PRD1 2367 aa7.94□□□□□ -1.14
CCSER1-208ENST00000509109 A0A087X0B3 334 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 TRAV19A0A0A6YYK7 116 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 MYBPHLA2RUH7 354 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 GOLGA8IPA6NC78 632 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 GOLGA8JA6NMD2 632 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 PRPF6O94906 941 aaKnown RBP7.93□□□□□ -1.14
CCSER1-208ENST00000509109 PAPSS2O95340 614 aaPredicted RBP7.93□□□□□ -1.14
CCSER1-208ENST00000509109 CKMP06732 381 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 CHRNB1P11230 501 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 ANXA13P27216 316 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 CNR2P34972 360 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 MAGEA11P43364 429 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 IKZF1Q13422 519 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 ZNF268Q14587 947 aaPredicted RBP7.93□□□□□ -1.14
CCSER1-208ENST00000509109 PUM1Q14671 1186 aaKnown RBP eCLIP7.93□□□□□ -1.14
CCSER1-208ENST00000509109 PDGFRLQ15198 375 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 SNRNP35Q16560 246 aaKnown RBP7.93□□□□□ -1.14
CCSER1-208ENST00000509109 VSTM1Q6UX27 236 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 KIAA2013Q8IYS2 634 aa7.93□□□□□ -1.14
CCSER1-208ENST00000509109 CEP57L1Q8IYX8 460 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms