RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 PAEPP09466 180 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 BRD2P25440 801 aaKnown RBP16.97■□□□□ 0.31
LMNA-222ENST00000508500 PTGER3P43115 390 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 DHPSP49366 369 aaPredicted RBP16.97■□□□□ 0.31
LMNA-222ENST00000508500 RGS7P49802 495 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 ZNF132P52740 706 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 MFAP3P55082 362 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 MARSP56192 900 aaKnown RBP16.97■□□□□ 0.31
LMNA-222ENST00000508500 DAOAP59103 153 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 KCNH2Q12809 1159 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 TRIP4Q15650 581 aaPredicted RBP16.97■□□□□ 0.31
LMNA-222ENST00000508500 BSPRYQ5W0U4 402 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
LMNA-222ENST00000508500 C11orf74Q86VG3 221 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 TMEFF1Q8IYR6 380 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 PGBD3Q8N328 593 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 PPM1KQ8N3J5 372 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 EDEM1Q92611 657 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 PIWIL1Q96J94 861 aaKnown RBP16.97■□□□□ 0.31
LMNA-222ENST00000508500 DCLK3Q9C098 648 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 SLC6A17Q9H1V8 727 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 TMEM74BQ9NUR3 256 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 CACNA2D2Q9NY47 1150 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 HESX1Q9UBX0 185 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 KIAA1257Q9ULG3 409 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.97■□□□□ 0.31
LMNA-222ENST00000508500 ZNF510Q9Y2H8 683 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 SLC27A6Q9Y2P4 619 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 RAD54BQ9Y620 910 aa16.97■□□□□ 0.31
LMNA-222ENST00000508500 LNP1A1A4G5 178 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 GOLGA6L22H0YM25 854 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 GFRA2O00451 464 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 PIK3R2O00459 728 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 P4HA2O15460 535 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 SETSIPP0DME0 302 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 LCP1P13796 627 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 NDUFV2P19404 249 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 CHKAP35790 457 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 SLC8A3P57103 927 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 CNGA2Q16280 664 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 N4BP2L1Q5TBK1 243 aaPredicted RBP16.96■□□□□ 0.31
LMNA-222ENST00000508500 NUDT18Q6ZVK8 323 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 RSRC2Q7L4I2 434 aaKnown RBP16.96■□□□□ 0.31
LMNA-222ENST00000508500 ARMCX6Q7L4S7 300 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 FMNL3Q8IVF7 1028 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 CHPFQ8IZ52 775 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 SCML4Q8N228 414 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 CPXM2Q8N436 756 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 RBBP8NLQ8NC74 664 aaPredicted RBP16.96■□□□□ 0.31
LMNA-222ENST00000508500 IPO4Q8TEX9 1081 aaKnown RBP16.96■□□□□ 0.31
LMNA-222ENST00000508500 CLEC4CQ8WTT0 213 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 SRRTQ9BXP5 876 aaKnown RBP16.96■□□□□ 0.31
LMNA-222ENST00000508500 CALCOCO1Q9P1Z2 691 aa16.96■□□□□ 0.31
LMNA-222ENST00000508500 BICDL2A1A5D9 508 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 IRX4P78413 519 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 PAK1Q13153 545 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 ST3GAL2Q16842 350 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 TMEM215Q68D42 235 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 RNF43Q68DV7 783 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 IL31Q6EBC2 164 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 CYP2U1Q7Z449 544 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 DEFB119Q8N690 84 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 PIGKQ92643 395 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 PLD4Q96BZ4 506 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 EDEM2Q9BV94 578 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 LSM14BQ9BX40 385 aaKnown RBP16.95■□□□□ 0.3
LMNA-222ENST00000508500 CNGB3Q9NQW8 809 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 STRIP2Q9ULQ0 834 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 CEP295Q9C0D2 2601 aa16.95■□□□□ 0.3
LMNA-222ENST00000508500 IGHV1OR15-9A0A0B4J2B8 117 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 CDX4O14627 284 aaPredicted RBP16.94■□□□□ 0.3
LMNA-222ENST00000508500 MSI1O43347 362 aaKnown RBP16.94■□□□□ 0.3
LMNA-222ENST00000508500 IL12RB1P42701 662 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 GCNT1Q02742 428 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 ENPP2Q13822 863 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 LPCAT2Q7L5N7 544 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 SPACA7Q96KW9 195 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 ABCC13Q9NSE7 274 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 OLA1Q9NTK5 396 aaKnown RBP16.94■□□□□ 0.3
LMNA-222ENST00000508500 STOML2Q9UJZ1 356 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 CNTN6Q9UQ52 1028 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 HBS1LQ9Y450 684 aaKnown RBP16.94■□□□□ 0.3
LMNA-222ENST00000508500 STON1Q9Y6Q2 735 aa16.94■□□□□ 0.3
LMNA-222ENST00000508500 NYNRINQ9P2P1 1898 aaKnown RBP16.94■□□□□ 0.3
LMNA-222ENST00000508500 ATXN2Q99700 1313 aaKnown RBP16.94■□□□□ 0.3
LMNA-222ENST00000508500 ZZEF1O43149 2961 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 C4orf47A7E2U8 309 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 M0QYV0 167 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 MAP3K13O43283 966 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 TSPAN3O60637 253 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 AFPP02771 609 aaKnown RBP16.93■□□□□ 0.3
LMNA-222ENST00000508500 FYNP06241 537 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 ITPKAP23677 461 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 HOXD9P28356 352 aaPredicted RBP16.93■□□□□ 0.3
LMNA-222ENST00000508500 RPL34P49207 117 aaKnown RBP16.93■□□□□ 0.3
LMNA-222ENST00000508500 SGSHP51688 502 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 CAMK4Q16566 473 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 PEAR1Q5VY43 1037 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms