RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ZMPSTE24O75844 475 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 ITGBL1O95965 494 aaPredicted RBP17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 SERPINE1P05121 402 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 CBX3Q13185 183 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 TAF5Q15542 800 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 SCARA3Q6AZY7 606 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 TRIM67Q6ZTA4 783 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 ERI1Q8IV48 349 aaKnown RBP17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 BBS5Q8N3I7 341 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 OR5B17Q8NGF7 314 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 PRPF31Q8WWY3 499 aaKnown RBP17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 LRRC39Q96DD0 335 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 SLC2A11Q9BYW1 496 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 HAPLN2Q9GZV7 340 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 TMEM165Q9HC07 324 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 RBAKQ9NYW8 714 aaPredicted RBP17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 PCDHGC3Q9UN70 934 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 NRXN2Q9P2S2 1712 aa17.64■□□□□ 0.41
SQSTM1-211ENST00000506690 WDR81Q562E7 1941 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 PLA2G6O60733 806 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 SFNP31947 248 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 MAGEA6P43360 314 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 C16orf46Q6P387 395 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 SNRNP27Q8WVK2 155 aaKnown RBP17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 HSPBAP1Q96EW2 488 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 CGRRF1Q99675 332 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 RSAD1Q9HA92 442 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 PDLIM7Q9NR12 457 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 HOMER2Q9NSB8 354 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 FAIMQ9NVQ4 179 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 NCF2P19878 526 aaPredicted RBP17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 KCNA4P22459 653 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 ARRB2P32121 409 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 HSPA13P48723 471 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 COG7P83436 770 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 PCLAFQ15004 111 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 FAM182AQ5T1J6 154 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 VWA5B1Q5TIE3 1220 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 ZFP1Q6P2D0 407 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 GSDMBQ8TAX9 411 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 PPP4R1Q8TF05 950 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 CEP170P1Q96L14 293 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 CALN1Q9BXU9 219 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 PCSK1NQ9UHG2 260 aa17.63■□□□□ 0.41
SQSTM1-211ENST00000506690 DCXO43602 365 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 ZBTB14O43829 449 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 CD97P48960 835 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 CDKL1Q00532 357 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 PTPN20Q4JDL3 420 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 C6orf52Q5T4I8 152 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 N4BP2L1Q5TBK1 243 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 LRRC8BQ6P9F7 803 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 TFAP2BQ92481 460 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 RTP4Q96DX8 246 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 XPNPEP1Q9NQW7 623 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 RSL24D1Q9UHA3 163 aaKnown RBP17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 PRPF19Q9UMS4 504 aaKnown RBP17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 TNS1Q9HBL0 1735 aaKnown RBP17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 PLIN3O60664 434 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 GRK2P25098 689 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 CNTFP26441 200 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 MAGEA3P43357 314 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 DHRS4L2Q6PKH6 230 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 CROCCP3Q8IVE0 287 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 LILRA2Q8N149 483 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 RIN3Q8TB24 985 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 ACMSDQ8TDX5 336 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 KBTBD7Q8WVZ9 684 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 HSPH1Q92598 858 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 PHF12Q96QT6 1004 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 TRIM56Q9BRZ2 755 aaKnown RBP17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 INO80BQ9C086 356 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 SDCBP2Q9H190 292 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 CNTNAP2Q9UHC6 1331 aa17.62■□□□□ 0.41
SQSTM1-211ENST00000506690 G3V3G9 751 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 NFIBO00712 420 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 ENDOD1O94919 500 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 ASS1P00966 412 aaKnown RBP17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 YY1P25490 414 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 VARSP26640 1264 aaKnown RBP17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 MIPP30301 263 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 KRT76Q01546 638 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 KLF10Q13118 480 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 MMRN1Q13201 1228 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 ZBTB41Q5SVQ8 909 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 AMIGO2Q86SJ2 522 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 FAM160B2Q86V87 743 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 RNF168Q8IYW5 571 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 MASTLQ96GX5 879 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 SIGLEC10Q96LC7 697 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 IMPG2Q9BZV3 1241 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 PCDH18Q9HCL0 1135 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 CYP26B1Q9NR63 512 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 FBXO28Q9NVF7 368 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 TJP2Q9UDY2 1190 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 H0YCG3 227 aa17.61■□□□□ 0.41
SQSTM1-211ENST00000506690 GLRA3O75311 464 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms