RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 M0QYT0 321 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 PIP5K1CO60331 668 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 ACTL6BO94805 426 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 JAK3P52333 1124 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 PNLIPRP1P54315 467 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 POLE2P56282 527 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 FOXO1Q12778 655 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM187BQ17R55 369 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 TIGD6Q17RP2 521 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 PROSER3Q2NL68 480 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 AWAT1Q58HT5 328 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 ATPAF1Q5TC12 328 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 PRAMEF17Q5VTA0 474 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 JMJD6Q6NYC1 403 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 C16orf89Q6UX73 402 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 DCDC5Q6ZRR9 648 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 TRABD2AQ86V40 505 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 GALNT4Q8N4A0 578 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 NKAPQ8N5F7 415 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 PNLDC1Q8NA58 520 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 OTUD7AQ8TE49 926 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 RSC1A1Q92681 617 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 RITA1Q96K30 269 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 FYTTD1Q96QD9 318 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 PAAF1Q9BRP4 392 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 RTKNQ9BST9 563 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 PAGR1Q9BTK6 254 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 PABPC3Q9H361 631 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 AGO4Q9HCK5 861 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 FBXO28Q9NVF7 368 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 GAR1Q9NY12 217 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 LOC105369274A0A096LPK9 316 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 LOC102723532A0A0G2JNH3 316 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM90A18PA6NE21 464 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM90A16PA6NEW6 464 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM90A9PA6NNJ1 464 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM90A5PA8MXJ8 464 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 TISP43B9A030 160 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 IPO5O00410 1097 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 PPP6R2O75170 966 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM90A15PP0C7V4 464 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM90A14PP0C7W9 464 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 CYP2D6P10635 497 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 PEPDP12955 493 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 VEGFAP15692 232 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 THBS4P35443 961 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 GRK6P43250 576 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 PROK1P58294 105 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 AP2B1P63010 937 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 GAB1Q13480 694 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 DHX8Q14562 1220 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 POSTNQ15063 836 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 ZNF569Q5MCW4 686 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 ANKRD40Q6AI12 368 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 RANBP10Q6VN20 620 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 ZNF788Q6ZQV5 615 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 SLC44A2Q8IWA5 706 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 SMC5Q8IY18 1101 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 OR4N4Q8N0Y3 316 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 ANKRD42Q8N9B4 389 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 NPIPB3Q92617 1050 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 HERPUD2Q9BSE4 406 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 MECRQ9BV79 373 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 ADGRE3Q9BY15 652 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 BRD8Q9H0E9 1235 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 MYLK2Q9H1R3 596 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 VPS16Q9H269 839 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 SLITRK6Q9H5Y7 841 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 CCDC134Q9H6E4 229 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 PRDM8Q9NQV8 689 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 ABHD10Q9NUJ1 306 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 SEMA5BQ9P283 1151 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 DAPP1Q9UN19 280 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 CNTN6Q9UQ52 1028 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 PCDHGB3Q9Y5G1 929 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 COX11Q9Y6N1 276 aa4.63□□□□□ -1.67
TOPBP1-204ENST00000505804 ARHGEF17Q96PE2 2063 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 GXYLT2A0PJZ3 443 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 MANSC4A6NHS7 340 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 PRRT4C9JH25 899 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 BTBD19C9JJ37 291 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 UBE2Q2LH0YL09 131 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 EIF3JO75822 258 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 DUSP1P28562 367 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 INHBEP58166 350 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 WDR5P61964 334 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 TUBA4AP68366 448 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 SLC14A1Q13336 389 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 KCNB1Q14721 858 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 LARS2Q15031 903 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 SMN1Q16637 294 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 TRIM60Q495X7 471 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 C4orf46Q504U0 113 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 TMEM63BQ5T3F8 832 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 TANGO2Q6ICL3 276 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 KYAT3Q6YP21 454 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 RRAGAQ7L523 313 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 EXOC8Q8IYI6 725 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 SPATA5Q8NB90 893 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms