RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 SLC39A10Q9ULF5 831 aa3.56□□□□□ -1.84
ATXN3-208ENST00000504047 PCDHB2Q9Y5E7 798 aa3.56□□□□□ -1.84
ATXN3-208ENST00000504047 HEMK1Q9Y5R4 338 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-208ENST00000504047 PNMA6EA0A0J9YXQ4 647 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 J3KTA2 159 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 BCAR3O75815 825 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 CD63P08962 238 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 ATP5F1P24539 256 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 LMO1P25800 156 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 SLC8A1P32418 973 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 ALDH18A1P54886 795 aaKnown RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 RPS13P62277 151 aaKnown RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 HSF1Q00613 529 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 KPNB1Q14974 876 aaKnown RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 GLE1Q53GS7 698 aaKnown RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 ACSM6Q6P461 480 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 SLC2A7Q6PXP3 512 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 UEVLDQ8IX04 471 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 OR52L2PQ8NGH6 319 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 WDR60Q8WVS4 1066 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 GLMPQ8WWB7 406 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 AKAP1Q92667 903 aaKnown RBP eCLIP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 MAP4K1Q92918 833 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 PRR11Q96HE9 360 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 KAZALD1Q96I82 304 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 FAR2Q96K12 515 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 ABHD10Q9NUJ1 306 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 TUBA8Q9NY65 449 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 NFU1Q9UMS0 254 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 BTBD3Q9Y2F9 522 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 LRCH1Q9Y2L9 728 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 UBE2J1Q9Y385 318 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 DTNAQ9Y4J8 743 aa3.55□□□□□ -1.84
ATXN3-208ENST00000504047 SIRT4Q9Y6E7 314 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-208ENST00000504047 CCDC194A0A1B0GVG4 234 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 NPC1O15118 1278 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 INPPL1O15357 1258 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 CTIFO43310 598 aaKnown RBP3.54□□□□□ -1.84
ATXN3-208ENST00000504047 NTSR2O95665 410 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 MBPP02686 304 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-208ENST00000504047 PPM1AP35813 382 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 VPS41P49754 854 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 ELF2Q15723 593 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 SYCP2LQ5T4T6 812 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 PXDC1Q5TGL8 231 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 GATAD2AQ86YP4 633 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 NRSN1Q8IZ57 195 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-208ENST00000504047 PIGOQ8TEQ8 1089 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 TMEM41AQ96HV5 264 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 PRPF18Q99633 342 aaKnown RBP3.54□□□□□ -1.84
ATXN3-208ENST00000504047 SENP7Q9BQF6 1050 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 C1QTNF7Q9BXJ2 289 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 TRIM2Q9C040 744 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 TMEM8AQ9HCN3 771 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 ASNSD1Q9NWL6 643 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 FNIP2Q9P278 1114 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 SEMA5BQ9P283 1151 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 RNF7Q9UBF6 113 aa3.54□□□□□ -1.84
ATXN3-208ENST00000504047 CCDC187A0A096LP49 1063 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 GOLGA6L3A6NEY3 463 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 E5RJQ4 531 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 INO80B-WBP1J3KQ70 363 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 FCHO1O14526 889 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 PIP5K1BO14986 540 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 FFAR2O15552 330 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 SETSIPP0DME0 302 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 NPPBP16860 134 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 PTGER1P34995 402 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 HOXD12P35452 270 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 SLC12A2P55011 1212 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 ID2Q02363 134 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 STIM1Q13586 685 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 TRIM71Q2Q1W2 868 aaKnown RBP3.53□□□□□ -1.84
ATXN3-208ENST00000504047 SLC9C1Q4G0N8 1177 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 RINT1Q6NUQ1 792 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 XRRA1Q6P2D8 792 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 PGBD2Q6P3X8 592 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 PIK3AP1Q6ZUJ8 805 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 TOGARAM2Q6ZUX3 1019 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 MRPL10Q7Z7H8 261 aaKnown RBP3.53□□□□□ -1.84
ATXN3-208ENST00000504047 MORC1Q86VD1 984 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 MYLK4Q86YV6 388 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-208ENST00000504047 ZNF527Q8NB42 609 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 IPO4Q8TEX9 1081 aaKnown RBP3.53□□□□□ -1.84
ATXN3-208ENST00000504047 PIGKQ92643 395 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 ZNF778Q96MU6 729 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 PAAF1Q9BRP4 392 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 TTLL2Q9BWV7 592 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 CDCP1Q9H5V8 836 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 EPS8L2Q9H6S3 715 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 TRNAU1APQ9NX07 287 aaKnown RBP3.53□□□□□ -1.84
ATXN3-208ENST00000504047 CDC23Q9UJX2 597 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 PCDHB7Q9Y5E2 793 aa3.53□□□□□ -1.84
ATXN3-208ENST00000504047 COL3A1P02461 1466 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-208ENST00000504047 SETD1BQ9UPS6 1966 aaKnown RBP3.52□□□□□ -1.85
ATXN3-208ENST00000504047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-208ENST00000504047 PPEF2O14830 753 aa3.52□□□□□ -1.85
ATXN3-208ENST00000504047 TP73O15350 636 aa3.52□□□□□ -1.85
ATXN3-208ENST00000504047 TAF5LO75529 589 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms