RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 INO80BQ9C086 356 aaPredicted RBP25.31■■□□□ 1.64
DDX41-202ENST00000503078 NGRNQ9NPE2 291 aaKnown RBP25.31■■□□□ 1.64
DDX41-202ENST00000503078 ANKRD33BA6NCL7 494 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 ARHGAP42A6NI28 874 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 SPDYE16A6NNV3 312 aaPredicted RBP25.3■■□□□ 1.64
DDX41-202ENST00000503078 BIRC2Q13490 618 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 HNRNPDQ14103 355 aaKnown RBP25.3■■□□□ 1.64
DDX41-202ENST00000503078 TEDDM1Q5T9Z0 273 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 ARHGAP18Q8N392 663 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 ZNF668Q96K58 619 aaPredicted RBP25.3■■□□□ 1.64
DDX41-202ENST00000503078 MOCS1Q9NZB8 636 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 APOBEC2Q9Y235 224 aaKnown RBP25.3■■□□□ 1.64
DDX41-202ENST00000503078 IGKV6-21A0A0C4DH24 114 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 ITM2AO43736 263 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 GCATO75600 419 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 LYPLA1O75608 230 aaPredicted RBP25.3■■□□□ 1.64
DDX41-202ENST00000503078 CA9Q16790 459 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 SHKBP1Q8TBC3 707 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 WRNIP1Q96S55 665 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 TBCBQ99426 244 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 ZNF670Q9BS34 389 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 SNRNP25Q9BV90 132 aaKnown RBP25.3■■□□□ 1.64
DDX41-202ENST00000503078 HOXC10Q9NYD6 342 aa25.3■■□□□ 1.64
DDX41-202ENST00000503078 DPYSL4O14531 572 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 FGF3P11487 239 aaPredicted RBP25.29■■□□□ 1.64
DDX41-202ENST00000503078 CYP3A5P20815 502 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 ATICP31939 592 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 L1CAMP32004 1257 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 SLC1A6P48664 564 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 ZNF280AP59817 542 aaPredicted RBP25.29■■□□□ 1.64
DDX41-202ENST00000503078 MAP1SQ66K74 1059 aaPredicted RBP25.29■■□□□ 1.64
DDX41-202ENST00000503078 DHDDSQ86SQ9 333 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 CHST13Q8NET6 341 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 CXorf38Q8TB03 319 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 NLRP4Q96MN2 994 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 GCOM2Q9BZD3 368 aaPredicted RBP25.29■■□□□ 1.64
DDX41-202ENST00000503078 GBA2Q9HCG7 927 aaPredicted RBP25.29■■□□□ 1.64
DDX41-202ENST00000503078 ZDHHC7Q9NXF8 308 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 ETAA1Q9NY74 926 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 ZNF112Q9UJU3 913 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 LOC285556D6RIA3 1793 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 LACTBL1A8MY62 500 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 CCNT2O60583 730 aaKnown RBP25.29■■□□□ 1.64
DDX41-202ENST00000503078 P4HA1P13674 534 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 RPL10AP62906 217 aaKnown RBP25.29■■□□□ 1.64
DDX41-202ENST00000503078 JADE1Q6IE81 842 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 C16orf46Q6P387 395 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 CYS1Q717R9 158 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 ACMSDQ8TDX5 336 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 MMP19Q99542 508 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 EBF3Q9H4W6 596 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 VRTNQ9H8Y1 702 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 EMCNQ9ULC0 261 aa25.29■■□□□ 1.64
DDX41-202ENST00000503078 ZBTB42B2RXF5 422 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 LCLAT1Q6UWP7 414 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 PDSS2Q86YH6 399 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 OR6Y1Q8NGX8 325 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 AZIN2Q96A70 460 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 NRDE2Q9H7Z3 1164 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 IL1RAPL1Q9NZN1 696 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 TSPAN16Q9UKR8 245 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 TNFSF13BQ9Y275 285 aa25.28■■□□□ 1.64
DDX41-202ENST00000503078 GLRA3O75311 464 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 GRIA1P42261 906 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 CDK7P50613 346 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 COPAP53621 1224 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 N4BP2L1Q5TBK1 243 aaPredicted RBP25.27■■□□□ 1.64
DDX41-202ENST00000503078 DPY19L2Q6NUT2 758 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 METTL7BQ6UX53 244 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 ACAD11Q709F0 780 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 EXOC8Q8IYI6 725 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 PYDC1Q8WXC3 89 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 ITGA11Q9UKX5 1188 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 NFKBIEO00221 500 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 MDM4O15151 490 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 RNASEH1O60930 286 aaKnown RBP25.27■■□□□ 1.64
DDX41-202ENST00000503078 RTN3O95197 1032 aaPredicted RBP25.27■■□□□ 1.64
DDX41-202ENST00000503078 ZBTB7AO95365 584 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 PPP6R3Q5H9R7 873 aaPredicted RBP25.27■■□□□ 1.64
DDX41-202ENST00000503078 MARK2Q7KZI7 788 aaKnown RBP25.27■■□□□ 1.64
DDX41-202ENST00000503078 RASSF3Q86WH2 238 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 POU5F2Q8N7G0 328 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 HACL1Q9UJ83 578 aa25.27■■□□□ 1.64
DDX41-202ENST00000503078 BARX2Q9UMQ3 279 aaPredicted RBP25.27■■□□□ 1.64
DDX41-202ENST00000503078 SIN3BO75182 1162 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 GJB1P08034 283 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 SDC4P31431 198 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 NDST1P52848 882 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 ASPHQ12797 758 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 RALGPS1Q5JS13 557 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 GPR25O00155 361 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 CSDE1O75534 798 aaKnown RBP25.26■■□□□ 1.63
DDX41-202ENST00000503078 PFKMP08237 780 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 CYP2F1P24903 491 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 GSTT1P30711 240 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 RGS7P49802 495 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 RASIP1Q5U651 963 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 TRIM50Q86XT4 487 aa25.26■■□□□ 1.63
DDX41-202ENST00000503078 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.26■■□□□ 1.63
DDX41-202ENST00000503078 HPDLQ96IR7 371 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms