RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 PFDN6O15212 129 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 PTPN1P18031 435 aaKnown RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 ADORA2BP29275 332 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 MAGEA6P43360 314 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 CDK7P50613 346 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 ZNF157P51786 506 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 HUNKP57058 714 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 RIPK1Q13546 671 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 TMCO4Q5TGY1 634 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 CASC4Q6P4E1 433 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 C1orf228Q6PIY5 440 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 SPATA24Q86W54 205 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 WDTC1Q8N5D0 677 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 BRI3BPQ8WY22 251 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 EZH1Q92800 747 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 INPP5DQ92835 1189 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 STAMBPL1Q96FJ0 436 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 APOPT1Q96IL0 206 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 ZNF317Q96PQ6 595 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 WWP1Q9H0M0 922 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 ZCWPW1Q9H0M4 648 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 PCDH18Q9HCL0 1135 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 UTP6Q9NYH9 597 aaKnown RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 FZD1Q9UP38 647 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 PAPPA2Q9BXP8 1791 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 ARID2Q68CP9 1835 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 A0A0G2JMZ2 1700 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 A0A0A0MRY4 1105 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 LSM1O15116 133 aaKnown RBP7.65□□□□□ -1.19
PDGFC-203ENST00000502773 CIB2O75838 187 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 ANXA9O76027 345 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 GRK2P25098 689 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 KPNA1P52294 538 aaPredicted RBP7.65□□□□□ -1.19
PDGFC-203ENST00000502773 TPI1P60174 286 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 SPANXN3Q5MJ09 141 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 MAP3K21Q5TCX8 1036 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 CHSY1Q86X52 802 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 B3GALNT2Q8NCR0 500 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 RNF139Q8WU17 664 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 HTR3CQ8WXA8 447 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 SPATA13Q96N96 652 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 OSMRQ99650 979 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 MAGEB5Q9BZ81 275 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 RETREG1Q9H6L5 497 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 MANSC1Q9H8J5 431 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 ETNK2Q9NVF9 386 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 APOBEC2Q9Y235 224 aaKnown RBP7.65□□□□□ -1.19
PDGFC-203ENST00000502773 TSC22D4Q9Y3Q8 395 aa7.65□□□□□ -1.19
PDGFC-203ENST00000502773 BRCA1P38398 1863 aaKnown RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 FGF10O15520 208 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 HOXA2O43364 376 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 APOEP02649 317 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 COL6A1P12109 1028 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 SPRP35270 261 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 CHKAP35790 457 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 MRPS5P82675 430 aaKnown RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 PDE1BQ01064 536 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 ZBTB6Q15916 424 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 NFE2Q16621 373 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 INSCQ1MX18 579 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 MUM1Q2TAK8 710 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 CFAP157Q5JU67 520 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 ZC3H18Q86VM9 953 aaKnown RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 PPFIBP2Q8ND30 876 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 CCNYQ8ND76 341 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 JOSD2Q8TAC2 188 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 TTC17Q96AE7 1141 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 FGD4Q96M96 766 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 CDK5RAP1Q96SZ6 601 aaKnown RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 SDCBP2Q9H190 292 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 LRRC40Q9H9A6 602 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 LRRC4CQ9HCJ2 640 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 HACD3Q9P035 362 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 RABL2BQ9UNT1 228 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 FARP1Q9Y4F1 1045 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 GLRA3O75311 464 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 IL1BP01584 269 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 LCP1P13796 627 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 SCTRP47872 440 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 RGS7P49802 495 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 FSTL1Q12841 308 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 SMTNL2Q2TAL5 461 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 XKR4Q5GH76 650 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 BRMS1LQ5PSV4 323 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 PPP1R26Q5T8A7 1209 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 EMC1Q8N766 993 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 PLD5Q8N7P1 536 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 MDM1Q8TC05 714 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 DNAJB3Q8WWF6 145 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 SLC44A1Q8WWI5 657 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 CPT1BQ92523 772 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 QKIQ96PU8 341 aaKnown RBP eCLIP7.64□□□□□ -1.192e-6■■■■□ 20.3
PDGFC-203ENST00000502773 SNRNP25Q9BV90 132 aaKnown RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 TSPYL2Q9H2G4 693 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 PFDN4Q9NQP4 134 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 KLHL11Q9NVR0 708 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 NOP53Q9NZM5 478 aaKnown RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 KLHL8Q9P2G9 620 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-203ENST00000502773 KIAA1217Q5T5P2 1943 aa7.64□□□□□ -1.19
PDGFC-203ENST00000502773 E7ENQ6 273 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms