RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 CCL23P55773 120 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 TMEM132DQ14C87 1099 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 MSS51Q4VC12 460 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 WASHC2DQ5SRD0 308 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 SLC26A11Q86WA9 606 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 TMEM130Q8N3G9 435 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 EMC1Q8N766 993 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 RNF157Q96PX1 679 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 NT5C1AQ9BXI3 368 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 DNAI2Q9GZS0 605 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 KLC2Q9H0B6 622 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 SMYD3Q9H7B4 428 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 SAE1Q9UBE0 346 aaPredicted RBP12.89□□□□□ -0.35
AFF3-215ENST00000498090 ZFP69BQ9UJL9 534 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 STK38LQ9Y2H1 464 aa12.89□□□□□ -0.35
AFF3-215ENST00000498090 MEIS3P2A8K0S8 358 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 APOL1O14791 398 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 MDM4O15151 490 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 KRT37O76014 449 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 RECQL4O94761 1208 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 ATP5BP06576 529 aaKnown RBP12.88□□□□□ -0.35
AFF3-215ENST00000498090 CD48P09326 243 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 PDGFRAP16234 1089 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 PTPN4P29074 926 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 ELK3P41970 407 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 CDH8P55286 799 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 CDK18Q07002 472 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 KRT81Q14533 505 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
AFF3-215ENST00000498090 NLRP9Q7RTR0 991 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 KIF2BQ8N4N8 673 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 MCUQ8NE86 351 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 RAB3IL1Q8TBN0 382 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 STK32AQ8WU08 396 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 FAF2Q96CS3 445 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 VWCEQ96DN2 955 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 SNX27Q96L92 541 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 ZNF670Q9BS34 389 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 APOL6Q9BWW8 343 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 TLE6Q9H808 572 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 SLCO1B3Q9NPD5 702 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.88□□□□□ -0.35
AFF3-215ENST00000498090 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 MKS1Q9NXB0 559 aa12.88□□□□□ -0.35
AFF3-215ENST00000498090 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 TRIM43BA6NCK2 446 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 H7C0C1 242 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 ZNF189O75820 626 aaPredicted RBP12.87□□□□□ -0.35
AFF3-215ENST00000498090 AKAP5P24588 427 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 ADRA1DP25100 572 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 ITGB8P26012 769 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 SCNN1AP37088 669 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 ATP5OP48047 213 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 NEK3P51956 506 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 CRYMQ14894 314 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 PLEKHG4Q58EX7 1191 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 SLC9A4Q6AI14 798 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 ARCQ7LC44 396 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 RTN4RL1Q86UN2 441 aaPredicted RBP12.87□□□□□ -0.35
AFF3-215ENST00000498090 CDKL3Q8IVW4 592 aaPredicted RBP12.87□□□□□ -0.35
AFF3-215ENST00000498090 ZNF276Q8N554 614 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 MAB21L3Q8N8X9 362 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 RXFP2Q8WXD0 754 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 N4BP2L2Q92802 583 aaPredicted RBP12.87□□□□□ -0.35
AFF3-215ENST00000498090 TRIM43Q96BQ3 446 aaPredicted RBP12.87□□□□□ -0.35
AFF3-215ENST00000498090 TWNKQ96RR1 684 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 ADAM2Q99965 735 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 WDR83Q9BRX9 315 aaKnown RBP12.87□□□□□ -0.35
AFF3-215ENST00000498090 TSSK1BQ9BXA7 367 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 TRIM6Q9C030 488 aaPredicted RBP12.87□□□□□ -0.35
AFF3-215ENST00000498090 PLEKHA5Q9HAU0 1116 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 TMEM39AQ9NV64 488 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
AFF3-215ENST00000498090 CCDC22O60826 627 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 LUC7L3O95232 432 aaKnown RBP12.86□□□□□ -0.35
AFF3-215ENST00000498090 CXCL10P02778 98 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 ETV4P43268 484 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 NR2C2P49116 596 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 NDST1P52848 882 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 BCAR1P56945 870 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 DBN1Q16643 649 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 FAM91A1Q658Y4 838 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 OR6B2Q6IFH4 312 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 CYS1Q717R9 158 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 LRRC6Q86X45 466 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 DBF4BQ8NFT6 615 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 NSMCE1Q8WV22 266 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 STAMBPL1Q96FJ0 436 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 ZMAT2Q96NC0 199 aaKnown RBP12.86□□□□□ -0.35
AFF3-215ENST00000498090 IQCGQ9H095 443 aaKnown RBP12.86□□□□□ -0.35
AFF3-215ENST00000498090 RNF19AQ9NV58 838 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 DPP3Q9NY33 737 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 KLK14Q9P0G3 267 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 CHMP2BQ9UQN3 213 aa12.86□□□□□ -0.35
AFF3-215ENST00000498090 ANK1P16157 1881 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms