RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 EBNA1BP2Q99848 306 aaKnown RBP11.45□□□□□ -0.58
CMSS1-208ENST00000496116 ARHGEF3Q9NR81 526 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 SLC38A7Q9NVC3 462 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 MAD1L1Q9Y6D9 718 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 H3BRJ5 948 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 FAM155BO75949 473 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 ATP6V1G2O95670 118 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 PTPN1P18031 435 aaKnown RBP11.45□□□□□ -0.58
CMSS1-208ENST00000496116 RGS2P41220 211 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 NEK3P51956 506 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 KCNJ2P63252 427 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 CDK16Q00536 496 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 BEX3Q00994 111 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 SPDYAQ5MJ70 313 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 ASRGL1Q7L266 308 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 PRPF39Q86UA1 669 aaKnown RBP11.45□□□□□ -0.58
CMSS1-208ENST00000496116 OSTM1Q86WC4 334 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 ARRDC4Q8NCT1 418 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 LRRN4Q8WUT4 740 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 OLFM3Q96PB7 478 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 MED10Q9BTT4 135 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 MYLK2Q9H1R3 596 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 BAIAP2L1Q9UHR4 511 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 CHKBQ9Y259 395 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 USP3Q9Y6I4 520 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 SF3B1O75533 1304 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■■■■ 124.9
CMSS1-208ENST00000496116 A0A0A0MRY4 1105 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 TRIM49D1C9J1S8 452 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 C2CD2LO14523 706 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 ZNF189O75820 626 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 DGKIO75912 1065 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 FAM200BP0CF97 657 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 DHRS4L1P0CG22 281 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 MLNP12872 115 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 ETV4P43268 484 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 RASSF2P50749 326 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 FSCN1Q16658 493 aaKnown RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 ANKRD20A2Q5SQ80 823 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 ANKRD20A1Q5TYW2 823 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 ANKRD20A3Q5VUR7 823 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 UNC5AQ6ZN44 842 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 SH2D5Q6ZV89 423 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 ZNF534Q76KX8 674 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 ZNF276Q8N554 614 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 NT5C3BQ969T7 300 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 SPATA13Q96N96 652 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 FAM111AQ96PZ2 611 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 PPP1R10Q96QC0 940 aaKnown RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 RAB3IPQ96QF0 476 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 TSSK1BQ9BXA7 367 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 CD248Q9HCU0 757 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 NPHS2Q9NP85 383 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 ARHGEF4Q9NR80 690 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 PCDHA11Q9Y5I1 949 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 M0QYT0 321 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 PTGESO14684 152 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 GABRDO14764 452 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 PPP1R12AO14974 1030 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 FBXO21O94952 628 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 C1QAP02745 245 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 CYP2B6P20813 491 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 HOXC8P31273 242 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 SERPINB9P50453 376 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 GTF2A1P52655 376 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 AIF1P55008 147 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 PURAQ00577 322 aaKnown RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 PDK1Q15118 436 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 TAF1CQ15572 869 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 CCL14Q16627 93 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 WSCD1Q658N2 575 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 CLEC20AQ6ZU45 233 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 FAM228AQ86W67 206 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 TRIM42Q8IWZ5 723 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 PYROXD2Q8N2H3 581 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 TMEM86AQ8N2M4 240 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 RNF139Q8WU17 664 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 TTC17Q96AE7 1141 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 NPY6RQ99463 290 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 TRIM55Q9BYV6 548 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 MAGEB5Q9BZ81 275 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 NOD2Q9HC29 1040 aa11.44□□□□□ -0.58
CMSS1-208ENST00000496116 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-208ENST00000496116 CAPN9O14815 690 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 OPHN1O60890 802 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 TGDSO95455 350 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 ACAT1P24752 427 aaKnown RBP11.43□□□□□ -0.58
CMSS1-208ENST00000496116 LHX1P48742 406 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 GLUD2P49448 558 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 TKTL1P51854 596 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 DEUP1Q05D60 604 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 MDH1BQ5I0G3 518 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 FAM182AQ5T1J6 154 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 DENND5BQ6ZUT9 1274 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 CYS1Q717R9 158 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 NLRP9Q7RTR0 991 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 BNIPLQ7Z465 357 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 RSPH3Q86UC2 560 aa11.43□□□□□ -0.58
CMSS1-208ENST00000496116 CCNJLQ8IV13 435 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms