RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 C4orf50Q6ZRC1 276 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 FBXL16Q8N461 479 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 PDCL2Q8N4E4 241 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 BIRC7Q96CA5 298 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 SPATA17Q96L03 361 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 CEP295NLQ96MC4 621 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 SLITRK1Q96PX8 696 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 BBS2Q9BXC9 721 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 ASCL3Q9NQ33 180 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 KCNG1Q9UIX4 513 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 C2CD3Q4AC94 2353 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 PTPRJQ12913 1337 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 CLEC18AA5D8T8 446 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 OGTO15294 1046 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 HUS1O60921 280 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 SEMA4FO95754 770 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 ACP1P24666 158 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 PCSK1P29120 753 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 EPHA8P29322 1005 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 ACSL1P33121 698 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 KRT2P35908 639 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 PNPLA4P41247 253 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 LIG4P49917 911 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 CDH8P55286 799 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 RACK1P63244 317 aaKnown RBP10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 ASIC1P78348 528 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 NR5A1Q13285 461 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 LINC00303Q3SY05 128 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 HIST2H2BCQ6DN03 193 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 VSTM1Q6UX27 236 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 CLEC18BQ6UXF7 455 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 DAW1Q8N136 415 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 CLEC18CQ8NCF0 446 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 NSUN7Q8NE18 718 aaKnown RBP10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 UCMAQ8WVF2 138 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 TTLL2Q9BWV7 592 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 AGXT2Q9BYV1 514 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 TRIM9Q9C026 710 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 HAPLN2Q9GZV7 340 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 BTBD1Q9H0C5 482 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 GDF3Q9NR23 364 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 DPP3Q9NY33 737 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 WDR35Q9P2L0 1181 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 C2CD2Q9Y426 696 aa10.18□□□□□ -0.78
SMARCAL1-213ENST00000496037 CFAP99D6REC4 459 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 HNRNPDLO14979 420 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 TSPAN3O60637 253 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 CDKL5O76039 1030 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 ITGB2P05107 769 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 ADRB2P07550 413 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 FAM87AP0C7U9 286 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 MAPTP10636 758 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 IRF1P10914 325 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 ITGB6P18564 788 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 RPS6KB1P23443 525 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 CCT6AP40227 531 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 IFRD2Q12894 506 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 E2F5Q15329 346 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 CCDC142Q17RM4 750 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 ARL13BQ3SXY8 428 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 TDRD10Q5VZ19 366 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 USP53Q70EK8 1073 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 TMEM86AQ8N2M4 240 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 TMEM161BQ8NDZ6 487 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 EXTL1Q92935 676 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 RNF34Q969K3 372 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 CCNL2Q96S94 520 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 PKMYT1Q99640 499 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 MSTO1Q9BUK6 570 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 NACA2Q9H009 215 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 LHX5Q9H2C1 402 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 TMEM60Q9H2L4 133 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 ORC3Q9UBD5 711 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 L1RE1Q9UN81 338 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 MYOFQ9NZM1 2061 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 KNL1Q8NG31 2342 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 TCHHQ07283 1943 aa10.17□□□□□ -0.78
SMARCAL1-213ENST00000496037 FAM189A1O60320 539 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 CSO75390 466 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 BDNFP23560 247 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 COPAP53621 1224 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 EVCP57679 992 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 NOP14P78316 857 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 DAB2P98082 770 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 TAF10Q12962 218 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 SHBQ15464 509 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 HS1BP3Q53T59 392 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 C3orf38Q5JPI3 329 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 TPGS1Q6ZTW0 290 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 OXR1Q8N573 874 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 MYLPFQ96A32 169 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 SLC6A18Q96N87 628 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 SEMA3CQ99985 751 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 ASB7Q9H672 318 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 GJB4Q9NTQ9 266 aa10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 DDX19AQ9NUU7 478 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-213ENST00000496037 EVA1BQ9NVM1 165 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms