RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 CPNE8Q86YQ8 564 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 LRRC57Q8N9N7 239 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 MYADMQ96S97 322 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 NCAPGQ9BPX3 1015 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 IRX2Q9BZI1 471 aaPredicted RBP20.27■□□□□ 0.84
ATG3-208ENST00000495756 SMG9Q9H0W8 520 aaKnown RBP20.27■□□□□ 0.84
ATG3-208ENST00000495756 GOLPH3Q9H4A6 298 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 GKN1Q9NS71 199 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 TMEM51Q9NW97 253 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 DOCK8Q8NF50 2099 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 PALMO75781 387 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 IGLV3-27P01718 113 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 HMBSP08397 361 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 PCK1P35558 622 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 ZXDBP98169 803 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 RING1Q06587 406 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 CC2D1AQ6P1N0 951 aaPredicted RBP20.26■□□□□ 0.83
ATG3-208ENST00000495756 SND1Q7KZF4 910 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATG3-208ENST00000495756 ARID3BQ8IVW6 561 aaPredicted RBP20.26■□□□□ 0.83
ATG3-208ENST00000495756 USP13Q92995 863 aaPredicted RBP20.26■□□□□ 0.83
ATG3-208ENST00000495756 SLC39A13Q96H72 371 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 TDP1Q9NUW8 608 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 ALG6Q9Y672 507 aa20.26■□□□□ 0.83
ATG3-208ENST00000495756 ZFP37Q9Y6Q3 630 aaPredicted RBP20.26■□□□□ 0.83
ATG3-208ENST00000495756 HELZP42694 1942 aaKnown RBP20.26■□□□□ 0.83
ATG3-208ENST00000495756 NUP210Q8TEM1 1887 aaPredicted RBP20.26■□□□□ 0.83
ATG3-208ENST00000495756 PRAMEF12O95522 483 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 COMTP21964 271 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 MIPP30301 263 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 CCR1P32246 355 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 GBP2P32456 591 aaPredicted RBP20.25■□□□□ 0.83
ATG3-208ENST00000495756 SLC1A1P43005 524 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 PPP2R5DQ14738 602 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 ZC3H12AQ5D1E8 599 aaKnown RBP20.25■□□□□ 0.83
ATG3-208ENST00000495756 FAM78AQ5JUQ0 283 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 SLFN11Q7Z7L1 901 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 FAM131BQ86XD5 332 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 SMARCD2Q92925 531 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 RNF34Q969K3 372 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 FCRL2Q96LA5 508 aaPredicted RBP20.25■□□□□ 0.83
ATG3-208ENST00000495756 ASB16Q96NS5 453 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 CCL26Q9Y258 94 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 HYOU1Q9Y4L1 999 aa20.25■□□□□ 0.83
ATG3-208ENST00000495756 SLC2A3P11169 496 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 LAMP2P13473 410 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 TCF4P15884 667 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 KCNQ1P51787 676 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 BRMS1LQ5PSV4 323 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 SCYL2Q6P3W7 929 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 OTOP3Q7RTS5 596 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 SYCE1Q8N0S2 351 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 ADAMTS19Q8TE59 1207 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 PLD4Q96BZ4 506 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 WDCPQ9H6R7 721 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 PRDM6Q9NQX0 595 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.24■□□□□ 0.83
ATG3-208ENST00000495756 KCNU1A8MYU2 1149 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 LEFTY2O00292 366 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 SPOPO43791 374 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 KIF5CO60282 957 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 STC2O76061 302 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 IRF1P10914 325 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 SSR1P43307 286 aaKnown RBP20.24■□□□□ 0.83
ATG3-208ENST00000495756 TFF2Q03403 129 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 SMAD2Q15796 467 aaKnown RBP20.24■□□□□ 0.83
ATG3-208ENST00000495756 NUGGCQ68CJ6 796 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 PTCRAQ6ISU1 281 aaPredicted RBP20.24■□□□□ 0.83
ATG3-208ENST00000495756 DDX42Q86XP3 938 aaKnown RBP eCLIP20.24■□□□□ 0.83
ATG3-208ENST00000495756 TRIM58Q8NG06 486 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 SH3RF2Q8TEC5 729 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 ALS2CR12Q96Q35 445 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 TKTL2Q9H0I9 626 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 TRPV4Q9HBA0 871 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 CFAP97Q9P2B7 532 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 PCSK1NQ9UHG2 260 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 USP18Q9UMW8 372 aa20.24■□□□□ 0.83
ATG3-208ENST00000495756 PRPSAP2O60256 369 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 APOEP02649 317 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 HARS2P49590 506 aaKnown RBP20.23■□□□□ 0.83
ATG3-208ENST00000495756 TAS2R40P59535 323 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 SLC25A11Q02978 314 aaKnown RBP20.23■□□□□ 0.83
ATG3-208ENST00000495756 PUS10Q3MIT2 529 aaKnown RBP20.23■□□□□ 0.83
ATG3-208ENST00000495756 ZSCAN30Q86W11 494 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 UNC45BQ8IWX7 931 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 CELF5Q8N6W0 485 aaKnown RBP20.23■□□□□ 0.83
ATG3-208ENST00000495756 CCDC185Q8N715 623 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 WBP2Q969T9 261 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 PEBP4Q96S96 227 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 KIF9Q9HAQ2 790 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 ANLNQ9NQW6 1124 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 ARHGEF38Q9NXL2 777 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 EPS15L1Q9UBC2 864 aa20.23■□□□□ 0.83
ATG3-208ENST00000495756 I6L893 689 aaPredicted RBP20.22■□□□□ 0.83
ATG3-208ENST00000495756 GREM1O60565 184 aa20.22■□□□□ 0.83
ATG3-208ENST00000495756 KLKB1P03952 638 aa20.22■□□□□ 0.83
ATG3-208ENST00000495756 TCF3P15923 654 aa20.22■□□□□ 0.83
ATG3-208ENST00000495756 FCARP24071 287 aa20.22■□□□□ 0.83
ATG3-208ENST00000495756 IL1R2P27930 398 aa20.22■□□□□ 0.83
ATG3-208ENST00000495756 ADRA1BP35368 520 aa20.22■□□□□ 0.83
ATG3-208ENST00000495756 VIPR2P41587 438 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms