RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 BTBD16Q32M84 506 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 ZNF569Q5MCW4 686 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 AKNAD1Q5T1N1 836 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 TANGO2Q6ICL3 276 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 MSANTD2Q6P1R3 559 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 NAPRTQ6XQN6 538 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 RAB11FIP2Q7L804 512 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 GLCCI1Q86VQ1 547 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 SLC44A2Q8IWA5 706 aaPredicted RBP3.16□□□□□ -1.9
LRIF1-203ENST00000494675 SFTPA1Q8IWL2 248 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.16□□□□□ -1.9
LRIF1-203ENST00000494675 PNPLA1Q8N8W4 532 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 SCAMP5Q8TAC9 235 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 PPM1EQ8WY54 764 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 TBC1D5Q92609 795 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 TRAPPC9Q96Q05 1148 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 DUSP26Q9BV47 211 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 TAF1DQ9H5J8 278 aaPredicted RBP3.16□□□□□ -1.9
LRIF1-203ENST00000494675 CPNE5Q9HCH3 593 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 IL17RBQ9NRM6 502 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 FBXO28Q9NVF7 368 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 KIF17Q9P2E2 1029 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 SLC17A6Q9P2U8 582 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 NFU1Q9UMS0 254 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 DAPP1Q9UN19 280 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 DGKBQ9Y6T7 804 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 EFCAB8A8MWE9 144 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 KIF28PB7ZC32 967 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 MGST3O14880 152 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 CTIFO43310 598 aaKnown RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 RPP40O75818 363 aaKnown RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 TMIGD3P0DMS9 266 aaPredicted RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 ALADP13716 330 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 HSD3B1P14060 373 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 MMP8P22894 467 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 CACNA2D1P54289 1103 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 PNLIPRP1P54315 467 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 ARL4CP56559 192 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 PSG6Q00889 435 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 CCDC15Q0P6D6 951 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 PPFIA1Q13136 1202 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 DNASE1L3Q13609 305 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 CBFBQ13951 182 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 TMEM95Q3KNT9 176 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 C4orf46Q504U0 113 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 ANKRD45Q5TZF3 282 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 FAM90A2PQ658T7 463 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 NFRKBQ6P4R8 1299 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 KIRREL2Q6UWL6 708 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 TRABD2AQ86V40 505 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 ANKRD18AQ8IVF6 992 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 TERB1Q8NA31 727 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 SIMC1Q8NDZ2 872 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 SLC22A17Q8WUG5 538 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 HMGB4Q8WW32 186 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 C3orf49Q96BT1 292 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 PRR11Q96HE9 360 aaPredicted RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 HS6ST2Q96MM7 605 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 CIPCQ9C0C6 399 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 CCDC134Q9H6E4 229 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 ELAC1Q9H777 363 aaKnown RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 SEPSECSQ9HD40 501 aaKnown RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 ITM2CQ9NQX7 267 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 SRP68Q9UHB9 627 aaKnown RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 TLK1Q9UKI8 766 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 VPS4AQ9UN37 437 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 UBE2J1Q9Y385 318 aaPredicted RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 PCDHB7Q9Y5E2 793 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 PCDHB2Q9Y5E7 798 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 ENTPD2Q9Y5L3 495 aa3.15□□□□□ -1.9
LRIF1-203ENST00000494675 SETD1BQ9UPS6 1966 aaKnown RBP3.15□□□□□ -1.9
LRIF1-203ENST00000494675 LARGE1O95461 756 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 C1RP00736 705 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 HNRNPCP07910 306 aaKnown RBP eCLIP3.15□□□□□ -1.91
LRIF1-203ENST00000494675 CST5P28325 142 aaPredicted RBP3.15□□□□□ -1.91
LRIF1-203ENST00000494675 CYP4F2P78329 520 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 RNASE12Q5GAN4 147 aaKnown RBP3.15□□□□□ -1.91
LRIF1-203ENST00000494675 ANKRD40Q6AI12 368 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 CEP85Q6P2H3 762 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 RRAGAQ7L523 313 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 C12orf76Q8N812 135 aaPredicted RBP3.15□□□□□ -1.91
LRIF1-203ENST00000494675 CPT1BQ92523 772 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 MCRS1Q96EZ8 462 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 REXO5Q96IC2 774 aaKnown RBP3.15□□□□□ -1.91
LRIF1-203ENST00000494675 FAR2Q96K12 515 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 ZSCAN31Q96LW9 406 aaPredicted RBP3.15□□□□□ -1.91
LRIF1-203ENST00000494675 MMS19Q96T76 1030 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 MACROD1Q9BQ69 325 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 VPS16Q9H269 839 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 SAP30LQ9HAJ7 183 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 VPS45Q9NRW7 570 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 ASB6Q9NWX5 421 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 C19orf53Q9UNZ5 99 aaPredicted RBP3.15□□□□□ -1.91
LRIF1-203ENST00000494675 CNTN6Q9UQ52 1028 aa3.15□□□□□ -1.91
LRIF1-203ENST00000494675 FNDC1Q4ZHG4 1894 aaPredicted RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 CCDC187A0A096LP49 1063 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 CCDC189A1A4V9 331 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 FAM90A18PA6NE21 464 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 FAM90A16PA6NEW6 464 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 FAM90A9PA6NNJ1 464 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms