RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 RABGGTBP53611 331 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 YWHAGP61981 247 aaKnown RBP eCLIP7.05□□□□□ -1.28
MSH5-217ENST00000494458 DEFB103AP81534 67 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 KRT17Q04695 432 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ZNF33AQ06730 810 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 SLC10A2Q12908 348 aaPredicted RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 RAB33AQ14088 237 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 PPP2R5DQ14738 602 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 CDO1Q16878 200 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 BRMS1LQ5PSV4 323 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ACBD5Q5T8D3 534 aaPredicted RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 TPGS2Q68CL5 300 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 LRIG3Q6UXM1 1119 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 RNF19BQ6ZMZ0 732 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 SND1Q7KZF4 910 aaKnown RBP eCLIP7.05□□□□□ -1.28
MSH5-217ENST00000494458 KLHDC8BQ8IXV7 354 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 GSPT2Q8IYD1 628 aaKnown RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 ZNF683Q8IZ20 524 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ARHGAP18Q8N392 663 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 GLIS1Q8NBF1 620 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 COLGALT1Q8NBJ5 622 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ATAD1Q8NBU5 361 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 BBOF1Q8ND07 529 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 FBXO22Q8NEZ5 403 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ZNF461Q8TAF7 563 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ZSCAN18Q8TBC5 510 aaPredicted RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 PHOSPHO2Q8TCD6 241 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 DQX1Q8TE96 717 aaKnown RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 IFT81Q8WYA0 676 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 OVCA2Q8WZ82 227 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 HSPH1Q92598 858 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 FAM149B1Q96BN6 582 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ACSF2Q96CM8 615 aaPredicted RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 LRRC45Q96CN5 670 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 SNF8Q96H20 258 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 C1orf74Q96LT6 269 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 HINFPQ9BQA5 517 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 TMEM109Q9BVC6 243 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 MAGEB5Q9BZ81 275 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 NMUR1Q9HB89 426 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 PCDH9Q9HC56 1237 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 OSER1Q9NX31 292 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 AFF4Q9UHB7 1163 aaKnown RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 SNX24Q9Y343 169 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 KIAA0100Q14667 2235 aaKnown RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 PLXNA3P51805 1871 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 WASH4PA8MWX3 477 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 HACD1B0YJ81 288 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 NT5C1B-RDH14C9J2C7 533 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 DNALI1O14645 258 aaPredicted RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 NDC80O14777 642 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 APOL1O14791 398 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 RRP9O43818 475 aaKnown RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 GCATO75600 419 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 TCEA3O75764 348 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 KRT14P02533 472 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 NUDT17P0C025 328 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 RBP3P10745 1247 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 ATF2P15336 505 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 RAG1P15918 1043 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 HMGA1P17096 107 aaKnown RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 GRIK1P39086 918 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 TUFMP49411 452 aaKnown RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 MLLT6P55198 1093 aaPredicted RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 USP46P62068 366 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 RPL10AP62906 217 aaKnown RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 ROR1Q01973 937 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 DEUP1Q05D60 604 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 PPIGQ13427 754 aaKnown RBP eCLIP7.04□□□□□ -1.281e-6■■■■□ 24.5
MSH5-217ENST00000494458 SNX1Q13596 522 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 SLMAPQ14BN4 828 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 LLGL1Q15334 1064 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 DDR2Q16832 855 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 C5orf22Q49AR2 442 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 TNFAIP8L3Q5GJ75 292 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 TMEM240Q5SV17 173 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 RNASEH2BQ5TBB1 312 aaKnown RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 KAZNQ674X7 775 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 NCBP2-AS2Q69YL0 99 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 SCYL2Q6P3W7 929 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 LILRA6Q6PI73 481 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 KLHDC10Q6PID8 442 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 C4orf22Q6V702 233 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 DENND5BQ6ZUT9 1274 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 TAC4Q86UU9 113 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 HOOK3Q86VS8 718 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 FAM131BQ86XD5 332 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 UNC45BQ8IWX7 931 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 TCEAL8Q8IYN2 117 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 PYROXD2Q8N2H3 581 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 NAT8LQ8N9F0 302 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 RNF139Q8WU17 664 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 HERVK_113Q902F9 699 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 P3H4Q92791 437 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 TRMT2BQ96GJ1 504 aaKnown RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 ZNF558Q96NG5 402 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 FMO2Q99518 471 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 CALN1Q9BXU9 219 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 UBE2OQ9C0C9 1292 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms