RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	SERPINA13P	Q6UXR4	307 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TAS1R3	Q7RTX0	852 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TIPARP	Q7Z3E1	657 aa	Known RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	NEK8	Q86SG6	692 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	ADGRF2	Q8IZF7	708 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	FBXO39	Q8N4B4	442 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TEX19	Q8NA77	164 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	GANC	Q8TET4	914 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	WBP2	Q969T9	261 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	ABHD17A	Q96GS6	310 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	SERAC1	Q96JX3	654 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	ACBD6	Q9BR61	282 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	SLC26A6	Q9BXS9	759 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	UNK	Q9C0B0	810 aa	Known RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TMEM245	Q9H330	911 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TMEM134	Q9H6X4	195 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	ANO2	Q9NQ90	1003 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	EVA1B	Q9NVM1	165 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	UCKL1	Q9NWZ5	548 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	DDX43	Q9NXZ2	648 aa	Known RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	EHD2	Q9NZN4	543 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	PCDHA12	Q9UN75	941 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	NCKAP1	Q9Y2A7	1128 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	SNX14	Q9Y5W7	946 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	PLXNA2	O75051	1894 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	ANKHD1	Q8IWZ3	2542 aa	Known RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	CPED1	A4D0V7	1026 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	PRR19	A6NJB7	356 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	TTLL8	A6PVC2	850 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	KPNA7	A9QM74	516 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	CLDN3	O15551	220 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	COCH	O43405	550 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	LUC7L3	O95232	432 aa	Known RBP	5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	CLTA	P09496	248 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	HGF	P14210	728 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	DGKA	P23743	735 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	ANXA13	P27216	316 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	PSMA5	P28066	241 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	UGT1A5	P35504	534 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	NPTX2	P47972	431 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	GALC	P54803	685 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	RPS14	P62263	151 aa	Known RBP	5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	EXOSC10	Q01780	885 aa	Known RBP	5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	ARID5A	Q03989	594 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	ZBTB16	Q05516	673 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	TAF10	Q12962	218 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	ENOX2	Q16206	610 aa	Known RBP	5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	LACTB2	Q53H82	288 aa	Predicted RBP	5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	DCAF6	Q58WW2	860 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	JADE1	Q6IE81	842 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	ZFAND4	Q86XD8	727 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	ZNF366	Q8N895	744 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	PRR7	Q8TB68	274 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	SORCS1	Q8WY21	1168 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	KIFAP3	Q92845	792 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	GTF3C6	Q969F1	213 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	P2RY11	Q96G91	374 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	SPATA17	Q96L03	361 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	HEXIM2	Q96MH2	286 aa	Known RBP	5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	SLITRK1	Q96PX8	696 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	SLC12A9	Q9BXP2	914 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	CIPC	Q9C0C6	399 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	SYNDIG1	Q9H7V2	258 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	SH3GLB2	Q9NR46	395 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	ELOVL2	Q9NXB9	296 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	MARK1	Q9P0L2	795 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	ACSL6	Q9UKU0	697 aa		5.69	□□□□□ -1.5
SEC13-219	ENST00000492602	APC	P25054	2843 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	ESPL1	Q14674	2120 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	KIF26B	Q2KJY2	2108 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	LY6G6E	A0A0G2JKS1	128 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	LRRC72	A6NJI9	287 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	BHMG1	C9JSJ3	638 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	HCRT	O43612	131 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	MAGEC1	O60732	1142 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	TCEA3	O75764	348 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	REC8	O95072	547 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	LDLR	P01130	860 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	GIMD1	P0DJR0	217 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	SPATA31C1	P0DKV0	1188 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	BDNF	P23560	247 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	SLC6A4	P31645	630 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	TXK	P42681	527 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	MAGEA11	P43364	429 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	RCAN1	P53805	252 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	MFAP3	P55082	362 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	MCL1	Q07820	350 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	STRN3	Q13033	797 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	ZNF177	Q13360	481 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CAMK2G	Q13555	558 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	KCNJ12	Q14500	433 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	E2F5	Q15329	346 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CDKN3	Q16667	212 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	HECTD3	Q5T447	861 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	TDRD10	Q5VZ19	366 aa	Known RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CPLX2	Q6PUV4	134 aa	Known RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	VSTM1	Q6UX27	236 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms