RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 COBLL1Q53SF7 1204 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 SGO2Q562F6 1265 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 CBWD3Q5JTY5 395 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 CBWD5Q5RIA9 395 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 SYCP2LQ5T4T6 812 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 ZNF658Q5TYW1 1059 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-231ENST00000492170 DENND1CQ8IV53 801 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 SLC41A1Q8IVJ1 513 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 CPXM2Q8N436 756 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 PLD4Q96BZ4 506 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 P2RY11Q96G91 374 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 ULBP1Q9BZM6 244 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 SLC6A17Q9H1V8 727 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 LRRC4Q9HBW1 653 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 FSCN3Q9NQT6 498 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 OLA1Q9NTK5 396 aaKnown RBP16.06■□□□□ 0.16
MRPL55-231ENST00000492170 THAP10Q9P2Z0 257 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-231ENST00000492170 HESX1Q9UBX0 185 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 SUSD2Q9UGT4 822 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 TSPAN16Q9UKR8 245 aa16.06■□□□□ 0.16
MRPL55-231ENST00000492170 UPK3BL1B0FP48 263 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 UPK3BL2E5RIL1 263 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 SYNCRIPO60506 623 aaKnown RBP16.05■□□□□ 0.16
MRPL55-231ENST00000492170 OPHN1O60890 802 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 SMC2O95347 1197 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 PROS1P07225 676 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 SYPP08247 313 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 CD19P15391 556 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 BST2Q10589 180 aaKnown RBP16.05■□□□□ 0.16
MRPL55-231ENST00000492170 EIF4HQ15056 248 aaKnown RBP16.05■□□□□ 0.16
MRPL55-231ENST00000492170 FUT11Q495W5 492 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 PM20D1Q6GTS8 502 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 UNQ6494/PRO21346Q6UXR6 183 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 ZC3H3Q8IXZ2 948 aaKnown RBP16.05■□□□□ 0.16
MRPL55-231ENST00000492170 RGL4Q8IZJ4 473 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 DDI1Q8WTU0 396 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 FOXJ1Q92949 421 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 IPO9Q96P70 1041 aaKnown RBP16.05■□□□□ 0.16
MRPL55-231ENST00000492170 GSDMAQ96QA5 445 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
MRPL55-231ENST00000492170 PRDM16Q9HAZ2 1276 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 CD93Q9NPY3 652 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 COQ4Q9Y3A0 265 aa16.05■□□□□ 0.16
MRPL55-231ENST00000492170 CFAP47Q6ZTR5 3102 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 GOLGA6L4A6NEF3 574 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 ARHGAP33O14559 1287 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 GNSP15586 552 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 TBXAS1P24557 533 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-231ENST00000492170 CD6P30203 668 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 IL12RB1P42701 662 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 HARS2P49590 506 aaKnown RBP16.04■□□□□ 0.16
MRPL55-231ENST00000492170 LRRC63Q05C16 580 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 PDE4CQ08493 712 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 ADIGQ0VDE8 80 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 SEMA3BQ13214 749 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 WDR45BQ5MNZ6 344 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 METTL3Q86U44 580 aaKnown RBP16.04■□□□□ 0.16
MRPL55-231ENST00000492170 FAM217AQ8IXS0 508 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 FMR1NBQ8N0W7 255 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-231ENST00000492170 SIX6OS1Q8N1H7 587 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 MINDY1Q8N5J2 469 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 ENGASEQ8NFI3 743 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 RNF139Q8WU17 664 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 ZNF419Q96HQ0 510 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-231ENST00000492170 PIWIL1Q96J94 861 aaKnown RBP16.04■□□□□ 0.16
MRPL55-231ENST00000492170 SLC2A11Q9BYW1 496 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 ADAM33Q9BZ11 813 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 CIPCQ9C0C6 399 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 ELOVL2Q9NXB9 296 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 ARMCX3Q9UH62 379 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-231ENST00000492170 WASF3Q9UPY6 502 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 CEP192Q8TEP8 1941 aa16.04■□□□□ 0.16
MRPL55-231ENST00000492170 MEI4A8MW99 385 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 TULP2O00295 520 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 SETSIPP0DME0 302 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 SPINK2P20155 84 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 ZNF445P59923 1031 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 ARID5AQ03989 594 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 ENPP2Q13822 863 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 ZNF234Q14588 700 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 TRIP4Q15650 581 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-231ENST00000492170 PLEKHG6Q3KR16 790 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 MPPE1Q53F39 396 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 ANKRD40Q6AI12 368 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 BHLHA9Q7RTU4 235 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 PIP4P1Q86T03 277 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 FMNL3Q8IVF7 1028 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 NDRG1Q92597 394 aaKnown RBP16.03■□□□□ 0.16
MRPL55-231ENST00000492170 SMARCE1Q969G3 411 aa16.03■□□□□ 0.16
MRPL55-231ENST00000492170 MKRN2Q9H000 416 aaKnown RBP16.03■□□□□ 0.16
MRPL55-231ENST00000492170 USP36Q9P275 1121 aaKnown RBP16.03■□□□□ 0.16
MRPL55-231ENST00000492170 HOOK1Q9UJC3 728 aaKnown RBP16.03■□□□□ 0.16
MRPL55-231ENST00000492170 HBS1LQ9Y450 684 aaKnown RBP16.03■□□□□ 0.16
MRPL55-231ENST00000492170 ZFHX4Q86UP3 3567 aa16.02■□□□□ 0.16
MRPL55-231ENST00000492170 PCDH15Q96QU1 1955 aa16.02■□□□□ 0.16
MRPL55-231ENST00000492170 C1QTNF9BB2RNN3 333 aa16.02■□□□□ 0.16
MRPL55-231ENST00000492170 TIMM44O43615 452 aa16.02■□□□□ 0.16
MRPL55-231ENST00000492170 C1QTNF9P0C862 333 aa16.02■□□□□ 0.16
MRPL55-231ENST00000492170 VDRP11473 427 aa16.02■□□□□ 0.16
MRPL55-231ENST00000492170 PMS1P54277 932 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms