RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 IQCF1Q8N6M8 205 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 DNASE2BQ8WZ79 361 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 MSI2Q96DH6 328 aaKnown RBP4.72□□□□□ -1.65
PHC3-213ENST00000491258 AIFM3Q96NN9 605 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 SF3B5Q9BWJ5 86 aaKnown RBP4.72□□□□□ -1.65
PHC3-213ENST00000491258 RHOBTB2Q9BYZ6 727 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 FAM83DQ9H4H8 585 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 AFF4Q9UHB7 1163 aaKnown RBP4.72□□□□□ -1.65
PHC3-213ENST00000491258 PCDHA7Q9UN72 937 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 A0A0G2JK05 382 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 CFAP69A5D8W1 941 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 H0YGN5 161 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 TNFRSF13BO14836 293 aaPredicted RBP4.71□□□□□ -1.66
PHC3-213ENST00000491258 SPTLC2O15270 562 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 GAS8-AS1O95177 125 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 MLH1P40692 756 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 RPS16P62249 146 aaKnown RBP4.71□□□□□ -1.66
PHC3-213ENST00000491258 DGKKQ5KSL6 1271 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 SWSAP1Q6NVH7 229 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 OVCH2Q7RTZ1 564 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.71□□□□□ -1.66
PHC3-213ENST00000491258 NMD3Q96D46 503 aaKnown RBP4.71□□□□□ -1.66
PHC3-213ENST00000491258 C22orf23Q9BZE7 217 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 ZCWPW1Q9H0M4 648 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 FZD3Q9NPG1 666 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 THSD1Q9NS62 852 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 DKK4Q9UBT3 224 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 ITGB1BP2Q9UKP3 347 aa4.71□□□□□ -1.66
PHC3-213ENST00000491258 AGO2Q9UKV8 859 aaKnown RBP4.71□□□□□ -1.66
PHC3-213ENST00000491258 RSF1Q96T23 1441 aaPredicted RBP4.71□□□□□ -1.66
PHC3-213ENST00000491258 PRPF4O43172 522 aaKnown RBP eCLIP4.7□□□□□ -1.66
PHC3-213ENST00000491258 TXNP10599 105 aaKnown RBP4.7□□□□□ -1.66
PHC3-213ENST00000491258 KCNJ4P48050 445 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 COPAP53621 1224 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 DNASE1L3Q13609 305 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 SMTNL2Q2TAL5 461 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 PLAG1Q6DJT9 500 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 MZT2AQ6P582 158 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 TPH2Q8IWU9 490 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 NR4A3Q92570 626 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 CHST8Q9H2A9 424 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 ASNSD1Q9NWL6 643 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 DDX56Q9NY93 547 aaKnown RBP4.7□□□□□ -1.66
PHC3-213ENST00000491258 VPS51Q9UID3 782 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 ZNF180Q9UJW8 692 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 SMARCA4P51532 1647 aa4.7□□□□□ -1.66
PHC3-213ENST00000491258 EVPLQ92817 2033 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.69□□□□□ -1.66
PHC3-213ENST00000491258 ATG13O75143 517 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 WDR47O94967 919 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 IGKV3-20P01619 116 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 SLC3A2P08195 630 aaKnown RBP4.69□□□□□ -1.66
PHC3-213ENST00000491258 IL1R1P14778 569 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 ENTPD1P49961 510 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 LTBQ06643 244 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 PIN1Q13526 163 aaPredicted RBP4.69□□□□□ -1.66
PHC3-213ENST00000491258 DLGAP5Q15398 846 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 C9orf50Q5SZB4 431 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 MANEALQ5VSG8 457 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 GFI1BQ5VTD9 330 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 APOA5Q6Q788 366 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 LPAR1Q92633 364 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 CELF1Q92879 486 aaKnown RBP4.69□□□□□ -1.66
PHC3-213ENST00000491258 P2RY11Q96G91 374 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 SENP7Q9BQF6 1050 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 ABHD10Q9NUJ1 306 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 HPSEQ9Y251 543 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 PCDHB2Q9Y5E7 798 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 PEG3Q9GZU2 1588 aa4.69□□□□□ -1.66
PHC3-213ENST00000491258 ISM1B1AKI9 464 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 CTNND1O60716 968 aaKnown RBP4.68□□□□□ -1.66
PHC3-213ENST00000491258 INMTO95050 263 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 BTF3P20290 206 aaKnown RBP4.68□□□□□ -1.66
PHC3-213ENST00000491258 HTR7P34969 479 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 RRP1P56182 461 aaKnown RBP4.68□□□□□ -1.66
PHC3-213ENST00000491258 CNN3Q15417 329 aaKnown RBP4.68□□□□□ -1.66
PHC3-213ENST00000491258 CNGA2Q16280 664 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 CUZD1Q86UP6 607 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 KAT2BQ92831 832 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 ZDHHC12Q96GR4 267 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 TTLL2Q9BWV7 592 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 IPO11Q9UI26 975 aaKnown RBP4.68□□□□□ -1.66
PHC3-213ENST00000491258 TPCN1Q9ULQ1 816 aa4.68□□□□□ -1.66
PHC3-213ENST00000491258 ZNF335Q9H4Z2 1342 aaPredicted RBP4.68□□□□□ -1.66
PHC3-213ENST00000491258 COL15A1P39059 1388 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 KIR2DS5A0A0G2JLQ3 304 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 TTC34A8MYJ7 566 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 KIR2DS3K7RE56 304 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 PAPSS2O95340 614 aaPredicted RBP4.67□□□□□ -1.66
PHC3-213ENST00000491258 ACAA1P09110 424 aaPredicted RBP4.67□□□□□ -1.66
PHC3-213ENST00000491258 CHRNB1P11230 501 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 GAD2Q05329 585 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 MTAPQ13126 283 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 KEAP1Q14145 624 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 GSG1LQ6UXU4 331 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 SLC39A5Q6ZMH5 540 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 SKAP1Q86WV1 359 aa4.67□□□□□ -1.66
PHC3-213ENST00000491258 ZCRB1Q8TBF4 217 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms