RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DYDC2Q96IM9 177 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 TINAGL1Q9GZM7 467 aaPredicted RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 PNNQ9H307 717 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 SMC4Q9NTJ3 1288 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 GIMAP4Q9NUV9 329 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 PREX1Q8TCU6 1659 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 MADDQ8WXG6 1647 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 DUOX2Q9NRD8 1548 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 GNAT3A8MTJ3 354 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 M0QZQ0 153 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 GSC2O15499 205 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 HCRTR2O43614 444 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 CCNDBP1O95273 360 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 ITGB2P05107 769 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 CSF1RP07333 972 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 RAB6AP20340 208 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 LRPAP1P30533 357 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 ICAM3P32942 547 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 RBM6P78332 1123 aaKnown RBP3.21□□□□□ -1.89
UBXN4-208ENST00000490163 NIPAL4Q0D2K0 466 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 RASA2Q15283 850 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 FAM198BQ6UWH4 519 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 DTX1Q86Y01 620 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 PTPMT1Q8WUK0 201 aaPredicted RBP3.21□□□□□ -1.89
UBXN4-208ENST00000490163 STON2Q8WXE9 905 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 AP5M1Q9H0R1 490 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 ABCG4Q9H172 646 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 PLEKHA4Q9H4M7 779 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 MID1IP1Q9NPA3 183 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 HEYLQ9NQ87 328 aaPredicted RBP3.21□□□□□ -1.89
UBXN4-208ENST00000490163 CDH7Q9ULB5 785 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 PCDHA1Q9Y5I3 950 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 SNX5Q9Y5X3 404 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 TSPOAP1O95153 1857 aa3.21□□□□□ -1.89
UBXN4-208ENST00000490163 TEX14Q8IWB6 1497 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 RIMS1Q86UR5 1692 aaKnown RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ANGPT2O15123 496 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ADAMDEC1O15204 470 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 RTN2O75298 545 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ITGA10O75578 1167 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 HEXIM1O94992 359 aaKnown RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 MT-ND3P03897 115 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CFIP05156 583 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ARSAP15289 507 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 SFPQP23246 707 aaKnown RBP eCLIP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 DAPK1P53355 1430 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 BCAT1P54687 386 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PLIN5Q00G26 463 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 MAMLD1Q13495 774 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 NOMO1Q15155 1222 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CBLL1Q75N03 491 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 MCEMP1Q8IX19 187 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ZDHHC14Q8IZN3 488 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 STPG3Q8N7X2 389 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 FAM181AQ8N9Y4 354 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 OCC1Q8TAD7 63 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CORO2AQ92828 525 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 MBD6Q96DN6 1003 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 WRNIP1Q96S55 665 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CRACR2AQ9BSW2 395 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CDADC1Q9BWV3 514 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 TMEM59LQ9UK28 342 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 YBX2Q9Y2T7 364 aaKnown RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 MAGED1Q9Y5V3 778 aaPredicted RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CCDC141Q6ZP82 1450 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PPLO60437 1756 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 LOC102723971A0A1B0GUV8 181 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 hCG_1807616A0A1W2PRN6 198 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CXorf49A8MYA2 514 aaPredicted RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 TMEM233B4DJY2 109 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 MEIS1O00470 390 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PPP6CO00743 305 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 GPR32O75388 356 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 BEST1O76090 585 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 USP1O94782 785 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 IGLV1-40P01703 118 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 TAL1P17542 331 aaPredicted RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 NFKBIAP25963 317 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CCR9P51686 369 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CDH8P55286 799 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ARF3P61204 181 aaPredicted RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ARF1P84077 181 aaKnown RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CALD1Q05682 793 aaKnown RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 SLC29A2Q14542 456 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 GRM4Q14833 912 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PLEKHN1Q494U1 663 aaPredicted RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PREPLQ4J6C6 727 aaPredicted RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ANKRD45Q5TZF3 282 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 TXNDC8Q6A555 127 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 SHISA2Q6UWI4 295 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 RPTNQ6XPR3 784 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF574Q6ZN55 896 aaPredicted RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CFAP77Q6ZQR2 320 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 DSG4Q86SJ6 1040 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PQLC1Q8N2U9 271 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 METTL6Q8TCB7 284 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 IRF7Q92985 503 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 RBM18Q96H35 190 aaKnown RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 YME1L1Q96TA2 773 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms