RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 AREL1O15033 823 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 ST6GAL1P15907 406 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 YY1P25490 414 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 SOX2P48431 317 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 ZNF84P51523 738 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 SLC12A2P55011 1212 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 DAG1Q14118 895 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 CNGA3Q16281 694 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 GPR162Q16538 588 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 GFOD2Q3B7J2 385 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 RRAGBQ5VZM2 374 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 FAM90A2PQ658T7 463 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 KIAA1161Q6NSJ0 714 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 ZNF549Q6P9A3 640 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 ZNF793Q6ZN11 406 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 RFX6Q8HWS3 928 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 TTC8Q8TAM2 541 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 PIGKQ92643 395 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 NUP62CLQ9H1M0 184 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 MLXIPQ9HAP2 919 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 MOV10Q9HCE1 1003 aaKnown RBP3.63□□□□□ -1.83
CPSF3-205ENST00000489629 ZBTB26Q9HCK0 441 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 HEYLQ9NQ87 328 aaPredicted RBP3.63□□□□□ -1.83
CPSF3-205ENST00000489629 VPS4AQ9UN37 437 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 PCDHB2Q9Y5E7 798 aa3.63□□□□□ -1.83
CPSF3-205ENST00000489629 HEMK1Q9Y5R4 338 aaPredicted RBP3.63□□□□□ -1.83
CPSF3-205ENST00000489629 GOLGA6CA6NDK9 693 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 GOLGA6BA6NDN3 693 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 CLCA1A8K7I4 914 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 FOXN3O00409 490 aaPredicted RBP3.62□□□□□ -1.83
CPSF3-205ENST00000489629 ATG13O75143 517 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 USP12O75317 370 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 IL18RAPO95256 599 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 GOLGA6DP0CG33 693 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 HOXD12P35452 270 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
CPSF3-205ENST00000489629 MTA1Q13330 715 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 SEMA3AQ14563 771 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 UBAP2Q5T6F2 1119 aaKnown RBP3.62□□□□□ -1.83
CPSF3-205ENST00000489629 DAB2IPQ5VWQ8 1189 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 KIAA0408Q6ZU52 694 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 C14orf80Q86SX3 495 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 ACRBPQ8NEB7 543 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 AKAP1Q92667 903 aaKnown RBP eCLIP3.62□□□□□ -1.83
CPSF3-205ENST00000489629 CELF1Q92879 486 aaKnown RBP3.62□□□□□ -1.83
CPSF3-205ENST00000489629 TSR2Q969E8 191 aaKnown RBP3.62□□□□□ -1.83
CPSF3-205ENST00000489629 GJA10Q969M2 543 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 APOL5Q9BWW9 433 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 HIPK2Q9H2X6 1198 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 GOLGA6AQ9NYA3 693 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 MSRB1Q9NZV6 116 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 TCEAL9Q9UHQ7 104 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 PCDHA12Q9UN75 941 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 SPATA31A5Q5VU36 1347 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 SPATA31A7Q8IWB4 1347 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 CNTNAP2Q9UHC6 1331 aa3.62□□□□□ -1.83
CPSF3-205ENST00000489629 OR2W5A6NFC9 320 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 F8W810 466 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 GTPBP1O00178 669 aaKnown RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 CTIFO43310 598 aaKnown RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 THAP12O43422 761 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 NDUFB8O95169 186 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 TFEBP19484 476 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 NDUFS1P28331 727 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 SLC5A2P31639 672 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 IGHMBP2P38935 993 aaKnown RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 IL6STP40189 918 aaPredicted RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 VPS41P49754 854 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 TMEM196Q5HYL7 178 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 MANEAQ5SRI9 462 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 TTLL5Q6EMB2 1281 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 PPP4R4Q6NUP7 873 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 LVRNQ6Q4G3 990 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 CRTC1Q6UUV9 634 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 KYAT3Q6YP21 454 aaKnown RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 CLASRPQ8N2M8 674 aaKnown RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 RNF152Q8N8N0 203 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 ATP11CQ8NB49 1132 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 SLC44A5Q8NCS7 719 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 B4GALNT2Q8NHY0 566 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 ABHD5Q8WTS1 349 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 SLC25A28Q96A46 364 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 IQCDQ96DY2 449 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 ZNF845Q96IR2 970 aaPredicted RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 SENP7Q9BQF6 1050 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 TUBB6Q9BUF5 446 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 PRDM11Q9NQV5 511 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 DDX21Q9NR30 783 aaKnown RBP eCLIP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 PAPOLBQ9NRJ5 636 aaKnown RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 ASNSD1Q9NWL6 643 aa3.61□□□□□ -1.83
CPSF3-205ENST00000489629 AGO2Q9UKV8 859 aaKnown RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 G3BP2Q9UN86 482 aaKnown RBP3.61□□□□□ -1.83
CPSF3-205ENST00000489629 A0A1W2PPC1 479 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 PRR23D1E9PI22 279 aaPredicted RBP3.6□□□□□ -1.83
CPSF3-205ENST00000489629 PRR23D2P0DMB1 279 aaPredicted RBP3.6□□□□□ -1.83
CPSF3-205ENST00000489629 DRD1P21728 446 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 MATN1P21941 496 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 MST1P26927 711 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 PIK3CBP42338 1070 aa3.6□□□□□ -1.83
CPSF3-205ENST00000489629 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms