RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GHRHRQ02643 423 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 NSUN2Q08J23 767 aaKnown RBP eCLIP4.28□□□□□ -1.72
RFC4-213ENST00000489028 SEMA3BQ13214 749 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 PICALMQ13492 652 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 RAB30Q15771 203 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 CCDC144NLQ6NUI1 221 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 MSANTD2Q6P1R3 559 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 FBXO38Q6PIJ6 1188 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 C16orf89Q6UX73 402 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 KYAT3Q6YP21 454 aaKnown RBP4.28□□□□□ -1.72
RFC4-213ENST00000489028 SRLQ86TD4 932 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 MYD88Q99836 296 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 EIF2AQ9BY44 585 aaKnown RBP4.28□□□□□ -1.72
RFC4-213ENST00000489028 NUAK2Q9H093 628 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 RXFP3Q9NSD7 469 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 TMEM184CQ9NVA4 438 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 MTMR4Q9NYA4 1195 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 IGSF9Q9P2J2 1179 aa4.28□□□□□ -1.72
RFC4-213ENST00000489028 ZNF521Q96K83 1311 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 J3KTA2 159 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 PLA2G6O60733 806 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 TAF5LO75529 589 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 SRGAP2BP0DMP2 458 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 IDEP14735 1019 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 DUSP1P28562 367 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 ZNF91Q05481 1191 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 TRIP6Q15654 476 aaKnown RBP4.27□□□□□ -1.73
RFC4-213ENST00000489028 ELF2Q15723 593 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 CNGA3Q16281 694 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 PFKFB3Q16875 520 aaPredicted RBP4.27□□□□□ -1.73
RFC4-213ENST00000489028 CCSAPQ6IQ19 270 aaPredicted RBP4.27□□□□□ -1.73
RFC4-213ENST00000489028 XRRA1Q6P2D8 792 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 TLDC1Q6P9B6 456 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 SHC4Q6S5L8 630 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 PIP4P1Q86T03 277 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 PRSS3P2Q8NHM4 247 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 DEPTORQ8TB45 409 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 AKAP1Q92667 903 aaKnown RBP eCLIP4.27□□□□□ -1.73
RFC4-213ENST00000489028 MCRS1Q96EZ8 462 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 FCRL5Q96RD9 977 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 STK33Q9BYT3 514 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 CDCP1Q9H5V8 836 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 ASNSD1Q9NWL6 643 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 SLC39A10Q9ULF5 831 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 AFG3L2Q9Y4W6 797 aa4.27□□□□□ -1.73
RFC4-213ENST00000489028 SIRT4Q9Y6E7 314 aaPredicted RBP4.27□□□□□ -1.73
RFC4-213ENST00000489028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.26□□□□□ -1.73
RFC4-213ENST00000489028 GXYLT2A0PJZ3 443 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 SLC22A23A1A5C7 686 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 C2CD4BA6NLJ0 364 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 INPPL1O15357 1258 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 PLAUP00749 431 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 ITGA5P08648 1049 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 CTSAP10619 480 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 TACR3P29371 465 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 SERPINB3P29508 390 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 HOXA7P31268 230 aaPredicted RBP4.26□□□□□ -1.73
RFC4-213ENST00000489028 GSTM5P46439 218 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 VPS41P49754 854 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 GRM4Q14833 912 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 P3H1Q32P28 736 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 ACSM6Q6P461 480 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 RFX6Q8HWS3 928 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 RASGRP3Q8IV61 690 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 C16orf71Q8IYS4 520 aaPredicted RBP4.26□□□□□ -1.73
RFC4-213ENST00000489028 NANOGP1Q8N7R0 232 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 NRACQ8N912 160 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 OR52L2PQ8NGH6 319 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 C16orf52Q8NHV5 167 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 OVCA2Q8WZ82 227 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 P2RY11Q96G91 374 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 NUDT22Q9BRQ3 303 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 RNF26Q9BY78 433 aaPredicted RBP4.26□□□□□ -1.73
RFC4-213ENST00000489028 EPS8L2Q9H6S3 715 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 NECTIN3Q9NQS3 549 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 ARL8BQ9NVJ2 186 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 CDC23Q9UJX2 597 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 HEMK1Q9Y5R4 338 aaPredicted RBP4.26□□□□□ -1.73
RFC4-213ENST00000489028 CACNA1IQ9P0X4 2223 aa4.26□□□□□ -1.73
RFC4-213ENST00000489028 M0QYT0 321 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 PIP5K1BO14986 540 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 NPC1O15118 1278 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 TLR2O60603 784 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 CNOT3O75175 753 aaKnown RBP4.25□□□□□ -1.73
RFC4-213ENST00000489028 PRF1P14222 555 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 ST6GAL1P15907 406 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 MATN1P21941 496 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 PTGER1P34995 402 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 HOXD12P35452 270 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 STAT6P42226 847 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 NR4A2P43354 598 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 SOX2P48431 317 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 AGTR2P50052 363 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 ZNF84P51523 738 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 RBMS2Q15434 407 aaKnown RBP4.25□□□□□ -1.73
RFC4-213ENST00000489028 TRIM71Q2Q1W2 868 aaKnown RBP4.25□□□□□ -1.73
RFC4-213ENST00000489028 DGKKQ5KSL6 1271 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 CCDC181Q5TID7 509 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 DEF8Q6ZN54 512 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms