RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 UBE2TQ9NPD8 197 aaPredicted RBP12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 CNGB3Q9NQW8 809 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 OLA1Q9NTK5 396 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 CACNA2D2Q9NY47 1150 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 CLEC4EQ9ULY5 219 aa12.48□□□□□ -0.41
CCHCR1-215ENST00000488920 MYH10P35580 1976 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 PATE3B3GLJ2 98 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 ZBTB24O43167 697 aaPredicted RBP12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 MSI1O43347 362 aaKnown RBP12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 CYBBP04839 570 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 KRT5P13647 590 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 PTGER3P43115 390 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 ZNF132P52740 706 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 LIMK1P53667 647 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 MFAP3P55082 362 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 DAOAP59103 153 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 GCNT1Q02742 428 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 GEN1Q17RS7 908 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 PPM1JQ5JR12 505 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 ARMCX6Q7L4S7 300 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 CPXM2Q8N436 756 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 TRIML1Q8N9V2 468 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 IPO4Q8TEX9 1081 aaKnown RBP12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 CLEC4CQ8WTT0 213 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 MED15Q96RN5 788 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 GABRG3Q99928 467 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 MIS12Q9H081 205 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 SLC6A17Q9H1V8 727 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 ABCC13Q9NSE7 274 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 CHMP5Q9NZZ3 219 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 CALCOCO1Q9P1Z2 691 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 SLC27A6Q9Y2P4 619 aa12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 HBS1LQ9Y450 684 aaKnown RBP12.47□□□□□ -0.41
CCHCR1-215ENST00000488920 TM4SF5O14894 197 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 KHNYNO15037 678 aaKnown RBP12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 NDUFV2P19404 249 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 STILQ15468 1287 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 RNF43Q68DV7 783 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 DENND1BQ6P3S1 775 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 SCUBE3Q8IX30 993 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 FAM217AQ8IXS0 508 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 SCML4Q8N228 414 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 SORCS1Q8WY21 1168 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 IRGQQ8WZA9 623 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 PIWIL1Q96J94 861 aaKnown RBP12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 CD248Q9HCU0 757 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 CNTN6Q9UQ52 1028 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 STON1Q9Y6Q2 735 aa12.46□□□□□ -0.41
CCHCR1-215ENST00000488920 MYO16Q9Y6X6 1858 aa12.46□□□□□ -0.42
CCHCR1-215ENST00000488920 LNP1A1A4G5 178 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 C4orf47A7E2U8 309 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 GFRA2O00451 464 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 IRX4P78413 519 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 APBA1Q02410 837 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 RPL6Q02878 288 aaKnown RBP12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 MPPE1Q53F39 396 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 ADGRF1Q5T601 910 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 GJB7Q6PEY0 223 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 GOLGA1Q92805 767 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 TMA16Q96EY4 203 aaKnown RBP12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 MRGPRX1Q96LB2 322 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 HSFY1Q96LI6 401 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 EDEM2Q9BV94 578 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 CIPCQ9C0C6 399 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 ACP6Q9NPH0 428 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 ST7Q9NRC1 585 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 TMEM74BQ9NUR3 256 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 ELOVL2Q9NXB9 296 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 THAP10Q9P2Z0 257 aaPredicted RBP12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 CYP8B1Q9UNU6 501 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 KIAA1549LQ6ZVL6 1849 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 EML5Q05BV3 1969 aa12.45□□□□□ -0.42
CCHCR1-215ENST00000488920 LAMA1P25391 3075 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 GOLGA6L7A0A1B0GV03 622 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 FBXO21O94952 628 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 LTFP02788 710 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 FYNP06241 537 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 SLC9A1P19634 815 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 ITPKAP23677 461 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 HOXD9P28356 352 aaPredicted RBP12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 USP8P40818 1118 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 IL12RB1P42701 662 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 GPD2P43304 727 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 FUT11Q495W5 492 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 LYSMD4Q5XG99 296 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 TMEM215Q68D42 235 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 MSANTD2Q6P1R3 559 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 KIAA1324Q6UXG2 1013 aaKnown RBP12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 SLC36A4Q6YBV0 504 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 ANKS1BQ7Z6G8 1248 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 IRF2BP1Q8IU81 584 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 SYT12Q8IV01 421 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 UCMAQ8WVF2 138 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms