RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 TICAM1Q8IUC6 712 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 TRIM22Q8IYM9 498 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 C4orf32Q8N8J7 132 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 KIAA1958Q8N8K9 716 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 SYT2Q8N9I0 419 aaPredicted RBP6.19□□□□□ -1.42
COL4A3-206ENST00000487633 OR2T3Q8NH03 318 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 ZNF564Q8TBZ8 553 aaPredicted RBP6.19□□□□□ -1.42
COL4A3-206ENST00000487633 MIB2Q96AX9 1013 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 ARRDC3Q96B67 414 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 ELMO3Q96BJ8 720 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 SGF29Q96ES7 293 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 FIZ1Q96SL8 496 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 SYT15Q9BQS2 421 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 MRPL45Q9BRJ2 306 aaKnown RBP6.19□□□□□ -1.42
COL4A3-206ENST00000487633 MMTAG2Q9BU76 263 aaKnown RBP6.19□□□□□ -1.42
COL4A3-206ENST00000487633 ACE2Q9BYF1 805 aaPredicted RBP6.19□□□□□ -1.42
COL4A3-206ENST00000487633 BTBD1Q9H0C5 482 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 ZNF71Q9NQZ8 489 aaPredicted RBP6.19□□□□□ -1.42
COL4A3-206ENST00000487633 THSD1Q9NS62 852 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 MAGEC2Q9UBF1 373 aaPredicted RBP6.19□□□□□ -1.42
COL4A3-206ENST00000487633 SEPT3Q9UH03 358 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 AGAP1Q9UPQ3 857 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 DAAM1Q9Y4D1 1078 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 SNX9Q9Y5X1 595 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 HIVEP3Q5T1R4 2406 aa6.19□□□□□ -1.42
COL4A3-206ENST00000487633 ZNF106Q9H2Y7 1883 aaKnown RBP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 WIPF3A6NGB9 483 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 K7EM74 188 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 CYP26A1O43174 497 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 XPOTO43592 962 aaKnown RBP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 NEBLO76041 1014 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 BEST1O76090 585 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 TNFSF15O95150 251 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 ZDHHC11BP0C7U3 371 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 C7P10643 843 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 CDK4P11802 303 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 PLS3P13797 630 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 PRF1P14222 555 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 PFKLP17858 780 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 CD38P28907 300 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 KRT2P35908 639 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 RXRGP48443 463 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 GALCP54803 685 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 NCKAP1LP55160 1127 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 MLLT10P55197 1068 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 CDH8P55286 799 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 NOP14P78316 857 aaKnown RBP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 STRN3Q13033 797 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 CAMK2GQ13555 558 aaPredicted RBP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 NCAPHQ15003 741 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 ARSHQ5FYA8 562 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 MDH1BQ5I0G3 518 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 RNF20Q5VTR2 975 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 BLOC1S2Q6QNY1 142 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 IGF2-ASQ6U949 168 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 Q6ZNB5 142 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 PAQR9Q6ZVX9 377 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 USP53Q70EK8 1073 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 HTR3DQ70Z44 454 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 CLEC14AQ86T13 490 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 LSMEM2Q8N112 164 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 OTUB2Q96DC9 234 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 BICD1Q96G01 975 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 FUBP3Q96I24 572 aaKnown RBP eCLIP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 APOLD1Q96LR9 279 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 DRC1Q96MC2 740 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 XPO6Q96QU8 1125 aaKnown RBP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 PLIN2Q99541 437 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 MSTO1Q9BUK6 570 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 NEUROG2Q9H2A3 272 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 TMEM245Q9H330 911 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 PRSS16Q9NQE7 514 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 AASDHPPTQ9NRN7 309 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 GEMIN8Q9NWZ8 242 aaKnown RBP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 ATXN7L1Q9ULK2 861 aaPredicted RBP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 RBM19Q9Y4C8 960 aaKnown RBP6.18□□□□□ -1.42
COL4A3-206ENST00000487633 PCDHGA4Q9Y5G9 962 aa6.18□□□□□ -1.42
COL4A3-206ENST00000487633 ZNF469Q96JG9 3925 aaPredicted RBP6.17□□□□□ -1.42
COL4A3-206ENST00000487633 CROCCQ5TZA2 2017 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 TLR4O00206 839 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 TULP1O00294 542 aaPredicted RBP6.17□□□□□ -1.42
COL4A3-206ENST00000487633 SYNCRIPO60506 623 aaKnown RBP6.17□□□□□ -1.42
COL4A3-206ENST00000487633 PPFIA2O75334 1257 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 PENKP01210 267 aaPredicted RBP6.17□□□□□ -1.42
COL4A3-206ENST00000487633 PIGRP01833 764 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 NR1D1P20393 614 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 ELAVL4P26378 380 aaKnown RBP6.17□□□□□ -1.42
COL4A3-206ENST00000487633 SLC5A2P31639 672 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 CASRP41180 1078 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 LIG4P49917 911 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 PDE6CP51160 858 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 BCAT1P54687 386 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 DAB2P98082 770 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 E2F1Q01094 437 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 MYL7Q01449 175 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 GRIN1Q05586 938 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 POM121L1PQ3SYA9 428 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 SV2CQ496J9 727 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 PERM1Q5SV97 790 aa6.17□□□□□ -1.42
COL4A3-206ENST00000487633 C1QL3Q5VWW1 255 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms