RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 EXTL2Q9UBQ6 330 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 AKAP11Q9UKA4 1901 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF215Q9UL58 517 aaPredicted RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 MAGED2Q9UNF1 606 aaPredicted RBP4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 WASF3Q9UPY6 502 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 PCDHGB6Q9Y5F9 930 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 NPFFR2Q9Y5X5 522 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 CLIC4Q9Y696 253 aa4.26□□□□□ -1.73
PRPF38B-205ENST00000485810 MYH7P12883 1935 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ARAP2Q8WZ64 1704 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 DISP2A7MBM2 1401 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 MROH5Q6ZUA9 1318 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CYP2D7A0A087X1C5 515 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 A0A1W2PPH5 198 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TCRBV5S2A0A599 114 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CLRN2A0PK11 232 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 KRT87PA6NCN2 255 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PGPEP1LA6NFU8 196 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 MROH6A6NGR9 719 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 H7BY64 318 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 DDX39AO00148 427 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PSMA7O14818 248 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CETN3O15182 167 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ARHGAP6O43182 974 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ZSCAN12O43309 604 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 RIPK2O43353 540 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 OPA1O60313 960 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 STX10O60499 249 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 SOCS5O75159 536 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 EPN2O95208 641 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PDE8BO95263 885 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 HRGP04196 525 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 S100A6P06703 90 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 POLBP06746 335 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 COL6A2P12110 1019 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 IL2RBP14784 551 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF18P17022 549 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ADORA1P30542 326 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 S100A5P33763 92 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 MCAMP43121 646 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 METAP2P50579 478 aaKnown RBP eCLIP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 NLRP5P59047 1200 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ARF3P61204 181 aaPredicted RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TUBB4BP68371 445 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ARF1P84077 181 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 GUCY1B3Q02153 619 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CYP4A11Q02928 519 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CEBPZQ03701 1054 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 RELQ04864 619 aaPredicted RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 GRIN1Q05586 938 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 KIF5AQ12840 1032 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ODF1Q14990 250 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 LLGL1Q15334 1064 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TESK1Q15569 626 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ZRSR1Q15695 479 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 KRBOX4Q5JUW0 171 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 FAM26FQ5R3K3 315 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 HAUS3Q68CZ6 603 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 KRT40Q6A162 431 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PGM2L1Q6PCE3 622 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 DARS2Q6PI48 645 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TRIM65Q6PJ69 517 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 SHC4Q6S5L8 630 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PPP1R21Q6ZMI0 780 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 B4GALNT4Q76KP1 1039 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ZC3H18Q86VM9 953 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 HEATR4Q86WZ0 1026 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TMTC1Q8IUR5 882 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TBC1D10CQ8IV04 446 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TMEM139Q8IV31 216 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 VSTM4Q8IW00 320 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ZFPM1Q8IX07 1006 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 FAM126BQ8IXS8 530 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CCDC33Q8N5R6 958 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CAMKK1Q8N5S9 505 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 MLKLQ8NB16 471 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PCSK9Q8NBP7 692 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 BBOF1Q8ND07 529 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TTLL11Q8NHH1 800 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 MOSPD2Q8NHP6 518 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PIP4K2CQ8TBX8 421 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TBC1D22AQ8WUA7 517 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 FAM216AQ8WUB2 273 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 LPIN2Q92539 896 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CASP10Q92851 521 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 GIMAP5Q96F15 307 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 FAXDC2Q96IV6 333 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TAAR9Q96RI9 348 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TUBA1CQ9BQE3 449 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 DDX23Q9BUQ8 820 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 UBXN6Q9BZV1 441 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 ARHGAP39Q9C0H5 1083 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 EPN3Q9H201 632 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 MRPL46Q9H2W6 279 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 VCX3BQ9H321 246 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 FOXP1Q9H334 677 aaPredicted RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 GHITMQ9H3K2 345 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 LY9Q9HBG7 655 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 CCDC177Q9NQR7 707 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms