RNA–Protein interactions for RNA: ENST00000485565.6

SPIN1-205, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-205ENST00000485565 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.78■□□□□ 0.6
SPIN1-205ENST00000485565 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.78■□□□□ 0.6
SPIN1-205ENST00000485565 KMT2BQ9UMN6 2715 aaPredicted RBP18.77■□□□□ 0.6
SPIN1-205ENST00000485565 A0A1W2PQF6 199 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 GNA14O95837 355 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 DAOAP59103 153 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 MAP7D1Q3KQU3 841 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 KIAA1211LQ6NV74 962 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 PMF1Q6P1K2 205 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 CYP2U1Q7Z449 544 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 FMNL3Q8IVF7 1028 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 RNF139Q8WU17 664 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 SLC35F5Q8WV83 523 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 PLD4Q96BZ4 506 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 SPACA7Q96KW9 195 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 KREMEN1Q96MU8 473 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 OLA1Q9NTK5 396 aaKnown RBP18.77■□□□□ 0.6
SPIN1-205ENST00000485565 RAD54BQ9Y620 910 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 CKAP5Q14008 2032 aa18.77■□□□□ 0.6
SPIN1-205ENST00000485565 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 WASH3PC4AMC7 463 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 MAP3K13O43283 966 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 AFPP02771 609 aaKnown RBP18.76■□□□□ 0.59
SPIN1-205ENST00000485565 MFAP3P55082 362 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 UBE2HP62256 183 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 GCNT1Q02742 428 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 TRIP4Q15650 581 aaPredicted RBP18.76■□□□□ 0.59
SPIN1-205ENST00000485565 CNGA2Q16280 664 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 GEN1Q17RS7 908 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 RNF43Q68DV7 783 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 ARMCX6Q7L4S7 300 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 TMEFF1Q8IYR6 380 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 CPXM2Q8N436 756 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 TRIML1Q8N9V2 468 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 IPO4Q8TEX9 1081 aaKnown RBP18.76■□□□□ 0.59
SPIN1-205ENST00000485565 INTS2Q9H0H0 1204 aaKnown RBP18.76■□□□□ 0.59
SPIN1-205ENST00000485565 CD248Q9HCU0 757 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 CNGB3Q9NQW8 809 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 CACNA2D2Q9NY47 1150 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 CALCOCO1Q9P1Z2 691 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 KIAA1468Q9P260 1216 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 CLEC4EQ9ULY5 219 aa18.76■□□□□ 0.59
SPIN1-205ENST00000485565 CEP295Q9C0D2 2601 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 PATE3B3GLJ2 98 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 MSI1O43347 362 aaKnown RBP18.75■□□□□ 0.59
SPIN1-205ENST00000485565 CYBBP04839 570 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 ZNF132P52740 706 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 N4BP2L1Q5TBK1 243 aaPredicted RBP18.75■□□□□ 0.59
SPIN1-205ENST00000485565 SDE2Q6IQ49 451 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 LPCAT2Q7L5N7 544 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 FAM217AQ8IXS0 508 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 SCML4Q8N228 414 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 CLEC4CQ8WTT0 213 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 PIGKQ92643 395 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 GABRG3Q99928 467 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 EDEM2Q9BV94 578 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 LSM14BQ9BX40 385 aaKnown RBP18.75■□□□□ 0.59
SPIN1-205ENST00000485565 SLC6A17Q9H1V8 727 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 ABCC13Q9NSE7 274 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 SLC27A6Q9Y2P4 619 aa18.75■□□□□ 0.59
SPIN1-205ENST00000485565 HBS1LQ9Y450 684 aaKnown RBP18.75■□□□□ 0.59
SPIN1-205ENST00000485565 LNP1A1A4G5 178 aa18.74■□□□□ 0.59
SPIN1-205ENST00000485565 NDUFV2P19404 249 aa18.74■□□□□ 0.59
SPIN1-205ENST00000485565 PTGER3P43115 390 aa18.74■□□□□ 0.59
SPIN1-205ENST00000485565 BYSLQ13895 437 aaKnown RBP18.74■□□□□ 0.59
SPIN1-205ENST00000485565 STILQ15468 1287 aa18.74■□□□□ 0.59
SPIN1-205ENST00000485565 DDI1Q8WTU0 396 aa18.74■□□□□ 0.59
SPIN1-205ENST00000485565 MED15Q96RN5 788 aa18.74■□□□□ 0.59
SPIN1-205ENST00000485565 MUC22E2RYF6 1773 aaPredicted RBP18.73■□□□□ 0.59
SPIN1-205ENST00000485565 TSPAN3O60637 253 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 KRT37O76014 449 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 KRT5P13647 590 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 PMLP29590 882 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 HARS2P49590 506 aaKnown RBP18.73■□□□□ 0.59
SPIN1-205ENST00000485565 MSANTD2Q6P1R3 559 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 CREBRFQ8IUR6 639 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 PIWIL1Q96J94 861 aaKnown RBP18.73■□□□□ 0.59
SPIN1-205ENST00000485565 CRACR2AQ9BSW2 395 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 MIS12Q9H081 205 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 UBE2TQ9NPD8 197 aaPredicted RBP18.73■□□□□ 0.59
SPIN1-205ENST00000485565 CD93Q9NPY3 652 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 CHMP5Q9NZZ3 219 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 RWDD2AQ9UIY3 292 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 STON1Q9Y6Q2 735 aa18.73■□□□□ 0.59
SPIN1-205ENST00000485565 ATXN2Q99700 1313 aaKnown RBP18.73■□□□□ 0.59
SPIN1-205ENST00000485565 USP24Q9UPU5 2620 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 GFRA2O00451 464 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 KHNYNO15037 678 aaKnown RBP18.72■□□□□ 0.59
SPIN1-205ENST00000485565 KCNK5O95279 499 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 FGFR1OPO95684 399 aaKnown RBP18.72■□□□□ 0.59
SPIN1-205ENST00000485565 LTFP02788 710 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 GJB7Q6PEY0 223 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 ANKS1BQ7Z6G8 1248 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 DEFB119Q8N690 84 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 IRGQQ8WZA9 623 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 HSFY1Q96LI6 401 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 TMEM74BQ9NUR3 256 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 ANGPTL2Q9UKU9 493 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 CYP8B1Q9UNU6 501 aa18.72■□□□□ 0.59
SPIN1-205ENST00000485565 CNTN6Q9UQ52 1028 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms