RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CCAR2Q8N163 923 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 NUP93Q8N1F7 819 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 TMCO5AQ8N6Q1 288 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 AMER2Q8N7J2 671 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 METTL6Q8TCB7 284 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 NOC3LQ8WTT2 800 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 SCFD2Q8WU76 684 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 RUFY2Q8WXA3 655 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 NKD2Q969F2 451 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 GFM2Q969S9 779 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 CHFRQ96EP1 664 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 FAM227BQ96M60 508 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 CCDC43Q96MW1 224 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 GPATCH1Q9BRR8 931 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 MAK16Q9BXY0 300 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 FTOQ9C0B1 505 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 ZCWPW1Q9H0M4 648 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 RANBP17Q9H2T7 1088 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 BRF2Q9HAW0 419 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 SLC35C2Q9NQQ7 365 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 LIN7CQ9NUP9 197 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 JKAMPQ9P055 326 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 MAGEL2Q9UJ55 1249 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 KCND3Q9UK17 655 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 BAG5Q9UL15 447 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 CNTN6Q9UQ52 1028 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 RUVBL1Q9Y265 456 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 NR2E1Q9Y466 385 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 PCDHGB5Q9Y5G0 923 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 A0A0G2JNJ9 132 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 TMEM232C9JQI7 657 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 H7C4K7 107 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 J3KTA2 159 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 GJB3O75712 270 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 ALDH1A2O94788 518 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 CHEK2O96017 543 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 AFPP02771 609 aaKnown RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 THEGLP0DJG4 465 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 PIM1P11309 404 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 FPR1P21462 350 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 TBXAS1P24557 533 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 TM4SF1P30408 202 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 BSGP35613 385 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 HADHAP40939 763 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 HNF4AP41235 474 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 VIPR2P41587 438 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 GPD2P43304 727 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 PTDSS1P48651 473 aaKnown RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 LMAN1P49257 510 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 PDE6CP51160 858 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 RRADP55042 308 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 PSMC1P62191 440 aaKnown RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 DPTQ07507 201 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 PTP4A2Q12974 167 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 GPS1Q13098 491 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 EIF2B5Q13144 721 aaKnown RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 GRM4Q14833 912 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 SMN1Q16637 294 aaKnown RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 WDR72Q3MJ13 1102 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 TBRG1Q3YBR2 411 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 CC2D1BQ5T0F9 858 aaKnown RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 OTUD7BQ6GQQ9 843 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 MAMDC4Q6UXC1 1216 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 FAM83HQ6ZRV2 1179 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 SEM1Q6ZVN7 128 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 ZNF365Q70YC5 407 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 OTOP2Q7RTS6 562 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 ZNF572Q7Z3I7 529 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 GALNT4Q8N4A0 578 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 FSIP1Q8NA03 581 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 ABHD5Q8WTS1 349 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 HMGB4Q8WW32 186 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 SCAMP4Q969E2 229 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 KTI12Q96EK9 354 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 OR14A2Q96R54 314 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 DPYSL5Q9BPU6 564 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 NUDT22Q9BRQ3 303 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 HGH1Q9BTY7 390 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 TINAGL1Q9GZM7 467 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 USP44Q9H0E7 712 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 SLC25A32Q9H2D1 315 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 C12orf65Q9H3J6 166 aaKnown RBP4.82□□□□□ -1.64
PTCD3-214ENST00000483925 TSPY26PQ9H489 355 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 PDRG1Q9NUG6 133 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 Q9UFV3 132 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 HPSEQ9Y251 543 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 GDAQ9Y2T3 454 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 VWA7Q9Y334 891 aa4.82□□□□□ -1.64
PTCD3-214ENST00000483925 FAM90A20PA6NIJ5 464 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ZNF785A8K8V0 405 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 M0QYG6 137 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 CHL1O00533 1208 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 PEX12O00623 359 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ZSCAN9O15535 394 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 SLC7A4O43246 635 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 PIAS2O75928 621 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 SLU7O95391 586 aaKnown RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 SPARCP09486 303 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 SBK3P0C264 359 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 RAP2AP10114 183 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms