RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 MBD5Q9P267 1494 aa4.41□□□□□ -1.7
LTN1-205ENST00000483326 PLXNC1O60486 1568 aa4.41□□□□□ -1.7
LTN1-205ENST00000483326 ARHGEF5Q12774 1597 aa4.41□□□□□ -1.7
LTN1-205ENST00000483326 TRIM64CA6NLI5 447 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 TBKBP1A7MCY6 615 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 TMEM110-MUSTN1A8MSY1 372 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 TRIM13O60858 407 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 NDST3O95803 873 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 C4BPAP04003 597 aaKnown RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 CSF1P09603 554 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 FTH1P19P0C7X4 201 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 NR2F1P10589 423 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 FPR2P25090 351 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 TACR1P25103 407 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 ATP5DP30049 168 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 MLH1P40692 756 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 MATR3P43243 847 aaKnown RBP eCLIP4.4□□□□□ -1.7
LTN1-205ENST00000483326 GPR15P49685 360 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 CCT8P50990 548 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 ARFIP2P53365 341 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 PMS2P54278 862 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 SESN2P58004 480 aaPredicted RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 PDE1BQ01064 536 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 MECOMQ03112 1051 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 MVKQ03426 396 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.4□□□□□ -1.7
LTN1-205ENST00000483326 DMPKQ09013 629 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 MAP3K12Q12852 859 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 CHAF1BQ13112 559 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 PKP1Q13835 747 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 CHRNA2Q15822 529 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 ASIC2Q16515 512 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 SLC44A4Q53GD3 710 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 SNX30Q5VWJ9 437 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 ZC3H14Q6PJT7 736 aaKnown RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 RPTNQ6XPR3 784 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 KANSL1Q7Z3B3 1105 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 R3HCC1LQ7Z5L2 792 aaKnown RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 ARHGEF25Q86VW2 580 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 FAM129CQ86XR2 697 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 ITPRIPQ8IWB1 547 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 RHOT1Q8IXI2 618 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 FUKQ8N0W3 1084 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 TTC39CQ8N584 583 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 AVL9Q8NBF6 648 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 GLB1L3Q8NCI6 653 aaPredicted RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 OR6B3Q8NGW1 331 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 OR6Y1Q8NGX8 325 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 RASSF8Q8NHQ8 419 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 FOXRED1Q96CU9 486 aaPredicted RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 RPGRIP1Q96KN7 1286 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 C20orf173Q96LM9 149 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 GDAP1L1Q96MZ0 367 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 NR1H4Q96RI1 486 aaPredicted RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 CTAGE1Q96RT6 745 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 PRPF18Q99633 342 aaKnown RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 DESI2Q9BSY9 194 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 CARD11Q9BXL7 1154 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 TWSG1Q9GZX9 223 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 OR10A4Q9H209 315 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 PABPC3Q9H361 631 aaKnown RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 RNPEPQ9H4A4 650 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 WDCPQ9H6R7 721 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 RPAP3Q9H6T3 665 aaPredicted RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 TRPV4Q9HBA0 871 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 CCDC177Q9NQR7 707 aaPredicted RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 TDP1Q9NUW8 608 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 RIC8BQ9NVN3 520 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 ANO10Q9NW15 660 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.4□□□□□ -1.7
LTN1-205ENST00000483326 HOXC10Q9NYD6 342 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 RASAL2Q9UJF2 1139 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 PCDHA6Q9UN73 950 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 CNPY2Q9Y2B0 182 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 SSX2IPQ9Y2D8 614 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 R3HDM2Q9Y2K5 976 aaKnown RBP4.4□□□□□ -1.7
LTN1-205ENST00000483326 CYP46A1Q9Y6A2 500 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 UHRF1BP1Q6BDS2 1440 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 FAM135AQ9P2D6 1515 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 ABCA6Q8N139 1617 aa4.4□□□□□ -1.7
LTN1-205ENST00000483326 TMEM247A6NEH6 219 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 PRAMEF25A6NGN4 478 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 USP27XA6NNY8 438 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 INO80B-WBP1J3KQ70 363 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 LSM1O15116 133 aaKnown RBP4.4□□□□□ -1.71
LTN1-205ENST00000483326 FYB1O15117 783 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 WDR46O15213 610 aaKnown RBP4.4□□□□□ -1.71
LTN1-205ENST00000483326 SPTLC2O15270 562 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 DIAPH2O60879 1101 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 ACTL6BO94805 426 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 ANP32DO95626 131 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 PRLP01236 227 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 CYBBP04839 570 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 PFKLP17858 780 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 HOXD10P28358 340 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 TCF7P36402 384 aaPredicted RBP4.4□□□□□ -1.71
LTN1-205ENST00000483326 ZNF132P52740 706 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 EPHA5P54756 1037 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 HERVK_113P62684 666 aa4.4□□□□□ -1.71
LTN1-205ENST00000483326 CCZ1BP86790 482 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms