RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 SRLQ86TD4 932 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 RAB11FIP4Q86YS3 637 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 SIRT6Q8N6T7 355 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 ACRBPQ8NEB7 543 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 RSPRY1Q96DX4 576 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 LRRC46Q96FV0 321 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 VN1R3Q9BXE9 311 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 EIF2AQ9BY44 585 aaKnown RBP4.33□□□□□ -1.72
COPA-204ENST00000481522 MAGEB5Q9BZ81 275 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 NLRC4Q9NPP4 1024 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 TFCP2L1Q9NZI6 479 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 MYO1AQ9UBC5 1043 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 DKK4Q9UBT3 224 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 CAPN11Q9UMQ6 739 aa4.33□□□□□ -1.72
COPA-204ENST00000481522 DRG1Q9Y295 367 aaKnown RBP4.33□□□□□ -1.72
COPA-204ENST00000481522 TNIKQ9UKE5 1360 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 AOX1Q06278 1338 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 PRUNE2Q8WUY3 3088 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 AP4M1O00189 453 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 MYL4P12829 197 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 HGFP14210 728 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 IDEP14735 1019 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 UQCRC1P31930 480 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 PGDP52209 483 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 BTKQ06187 659 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 GRM1Q13255 1194 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 PMS2P11Q13670 270 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 BRD3Q15059 726 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 IZUMO3Q5VZ72 239 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 HIBCHQ6NVY1 386 aaPredicted RBP4.32□□□□□ -1.72
COPA-204ENST00000481522 KIRREL2Q6UWL6 708 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 KRT28Q7Z3Y7 464 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 FAM186BQ8IYM0 893 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 TXLNBQ8N3L3 684 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 VGLL2Q8N8G2 317 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 CCDC150Q8NCX0 1101 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 CYP2W1Q8TAV3 490 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 BRI3BPQ8WY22 251 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 GJA10Q969M2 543 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 REPS1Q96D71 796 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 PRR25Q96S07 402 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 CERS4Q9HA82 394 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 CHST12Q9NRB3 414 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 AMFRQ9UKV5 643 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 CEP83Q9Y592 693 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 ZNF292O60281 2723 aa4.32□□□□□ -1.72
COPA-204ENST00000481522 ADGRB2O60241 1585 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 TULP4Q9NRJ4 1543 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 ANKRD17O75179 2603 aaKnown RBP4.31□□□□□ -1.72
COPA-204ENST00000481522 PTPN13Q12923 2485 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 H7C1Q1 480 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 M0R3H8 397 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 CES2O00748 559 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 NCK2O43639 380 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 EXOC3O60645 756 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 SNX2O60749 519 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 FGF18O76093 207 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 PDE8BO95263 885 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 HARSP12081 509 aaKnown RBP4.31□□□□□ -1.72
COPA-204ENST00000481522 GKP32189 559 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 GATMP50440 423 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 HOXA4Q00056 320 aaPredicted RBP4.31□□□□□ -1.72
COPA-204ENST00000481522 TIAL1Q01085 375 aaKnown RBP eCLIP4.31□□□□□ -1.72
COPA-204ENST00000481522 SRSF4Q08170 494 aaKnown RBP4.31□□□□□ -1.72
COPA-204ENST00000481522 KCNAB1Q14722 419 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 CYP1B1Q16678 543 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 CERKLQ49MI3 558 aaPredicted RBP4.31□□□□□ -1.72
COPA-204ENST00000481522 PRAMEF17Q5VTA0 474 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 KIAA1614Q5VZ46 1190 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 SERPINA13PQ6UXR4 307 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 SEMA6DQ8NFY4 1073 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 DEPTORQ8TB45 409 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 SGCZQ96LD1 299 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 MMS19Q96T76 1030 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 MACROD1Q9BQ69 325 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 CIPCQ9C0C6 399 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 SNX15Q9NRS6 342 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 DNAJB11Q9UBS4 358 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 HPSEQ9Y251 543 aa4.31□□□□□ -1.72
COPA-204ENST00000481522 SETD5Q9C0A6 1442 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 CEP290O15078 2479 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 KDM5AP29375 1690 aaKnown RBP4.3□□□□□ -1.72
COPA-204ENST00000481522 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 UBE2Q2LH0YL09 131 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 PMPCBO75439 489 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 USP1O94782 785 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 MYCLP12524 364 aaPredicted RBP4.3□□□□□ -1.72
COPA-204ENST00000481522 FPR3P25089 353 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 COPAP53621 1224 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 PROSER3Q2NL68 480 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 MANEALQ5VSG8 457 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 USP17L6PQ6QN14 398 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 CRELD2Q6UXH1 353 aaPredicted RBP4.3□□□□□ -1.72
COPA-204ENST00000481522 ZNF782Q6ZMW2 699 aaPredicted RBP4.3□□□□□ -1.72
COPA-204ENST00000481522 PTCHD4Q6ZW05 846 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 TERB1Q8NA31 727 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 PNLDC1Q8NA58 520 aaKnown RBP4.3□□□□□ -1.72
COPA-204ENST00000481522 NGDNQ8NEJ9 315 aaKnown RBP4.3□□□□□ -1.72
COPA-204ENST00000481522 ZNF566Q969W8 418 aa4.3□□□□□ -1.72
COPA-204ENST00000481522 ZBTB45Q96K62 511 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms