RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 DEUP1Q05D60 604 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 LMAN2Q12907 356 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 POSTNQ15063 836 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 RPS6KA2Q15349 733 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 BTBD16Q32M84 506 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 ZNF569Q5MCW4 686 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 TMEM63BQ5T3F8 832 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 LRCH2Q5VUJ6 765 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 FAM90A2PQ658T7 463 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 TANGO2Q6ICL3 276 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 MSANTD2Q6P1R3 559 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 NFRKBQ6P4R8 1299 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 LDHAL6AQ6ZMR3 332 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 RINLQ6ZS11 566 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 PIK3AP1Q6ZUJ8 805 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 SLC44A2Q8IWA5 706 aaPredicted RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 SMAP1Q8IYB5 467 aaPredicted RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 STT3BQ8TCJ2 826 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 OTUD7AQ8TE49 926 aaPredicted RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 PPM1EQ8WY54 764 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 DAZAP1Q96EP5 407 aaKnown RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 HS6ST2Q96MM7 605 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 MMS19Q96T76 1030 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 PABPC3Q9H361 631 aaKnown RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 ELAC1Q9H777 363 aaKnown RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 SEPSECSQ9HD40 501 aaKnown RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 SAYSD1Q9NPB0 183 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 PRDM8Q9NQV8 689 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 IL17RBQ9NRM6 502 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.37□□□□□ -1.71
CBX3-207ENST00000481300 ASAP1Q9ULH1 1129 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 UBE2J1Q9Y385 318 aaPredicted RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 PCDHB2Q9Y5E7 798 aa4.37□□□□□ -1.71
CBX3-207ENST00000481300 COL11A2P13942 1736 aaPredicted RBP4.37□□□□□ -1.71
CBX3-207ENST00000481300 KIF28PB7ZC32 967 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 IPO5O00410 1097 aaKnown RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 NPHP1O15259 732 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 CTIFO43310 598 aaKnown RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 DHHO43323 396 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 PPP6R2O75170 966 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 RPP40O75818 363 aaKnown RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 JTBO76095 146 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 VEGFAP15692 232 aaPredicted RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 IGHMBP2P38935 993 aaKnown RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 RENBPP51606 427 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 CYP4F2P78329 520 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 DNASE1L3Q13609 305 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 HSP90AB4PQ58FF6 505 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 RNASE12Q5GAN4 147 aaKnown RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 ANKRD45Q5TZF3 282 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 JMJD6Q6NYC1 403 aaPredicted RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 SERPINA13PQ6UXR4 307 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 TRIM72Q6ZMU5 477 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 TRABD2AQ86V40 505 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 C12orf76Q8N812 135 aaPredicted RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 TERB1Q8NA31 727 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 OR1N1Q8NGS0 311 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 SLC22A17Q8WUG5 538 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 HMGB4Q8WW32 186 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 CPT1BQ92523 772 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 C3orf49Q96BT1 292 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 TBC1D20Q96BZ9 403 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 REXO5Q96IC2 774 aaKnown RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 FAR2Q96K12 515 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 TRAPPC9Q96Q05 1148 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 TIMP4Q99727 224 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 THAP7Q9BT49 309 aaPredicted RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 TAF1DQ9H5J8 278 aaPredicted RBP4.36□□□□□ -1.71
CBX3-207ENST00000481300 CCDC134Q9H6E4 229 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 SAP30LQ9HAJ7 183 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 MLXIPQ9HAP2 919 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 RXFP3Q9NSD7 469 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 ASB6Q9NWX5 421 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 SH3BP4Q9P0V3 963 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 LUZP4Q9P127 313 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 KIF17Q9P2E2 1029 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 VPS4AQ9UN37 437 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 PCDHGB3Q9Y5G1 929 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 WNT6Q9Y6F9 365 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 DGKBQ9Y6T7 804 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 ATAD2BQ9ULI0 1458 aa4.36□□□□□ -1.71
CBX3-207ENST00000481300 POLR2AP24928 1970 aaKnown RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 GCATO75600 419 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 LARGE1O95461 756 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 SLC3A2P08195 630 aaKnown RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 ALADP13716 330 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 HSD3B1P14060 373 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 WT1P19544 449 aaPredicted RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 MATN1P21941 496 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 THBS4P35443 961 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 ELLP55199 621 aaPredicted RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 ARL4CP56559 192 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 HOXA4Q00056 320 aaPredicted RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 CFHR3Q02985 330 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 RNASELQ05823 741 aaKnown RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 SF3A3Q12874 501 aaKnown RBP eCLIP4.35□□□□□ -1.71
CBX3-207ENST00000481300 PPFIA1Q13136 1202 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 TAF5Q15542 800 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 ADCK5Q3MIX3 580 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 TRIM60Q495X7 471 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms