RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 DCCP43146 1447 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 MYOCOSA0A1B0GUC4 107 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 A0A1W2PRG0 241 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 LRRIQ4A6NIV6 560 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 CDK14O94921 469 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 FGGP02679 453 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 KRT10P13645 584 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 ATF4P18848 351 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 CACNB3P54284 484 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 STAT4Q14765 748 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 PFKFB3Q16875 520 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 TDRD12Q587J7 1177 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 AARS2Q5JTZ9 985 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 SNAP47Q5SQN1 464 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 TATDN1Q6P1N9 297 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 GALNT18Q6P9A2 607 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 TTC5Q8N0Z6 440 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 OR5H6Q8NGV6 325 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 S100ZQ8WXG8 99 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 NTN4Q9HB63 628 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 PAQR5Q9NXK6 330 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 NPAP1Q9NZP6 1156 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 C1orf232A0A0U1RR37 186 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 A0A1W2PQ72 361 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 HNRNPCL2B2RXH8 293 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 TOR1AO14656 332 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 APOL1O14791 398 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 ST8SIA5O15466 376 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 ATG13O75143 517 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 MMP1P03956 469 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 KRT8P05787 483 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 CD247P20963 164 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 GARTP22102 1010 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 PMS1P54277 932 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 NFATC3Q12968 1075 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 GK3PQ14409 553 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 HERC3Q15034 1050 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 TBRG1Q3YBR2 411 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 ESCO2Q56NI9 601 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 TNNI3KQ59H18 835 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 FGD3Q5JSP0 725 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 HABP4Q5JVS0 413 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 RABGAP1LQ5R372 815 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 FKBP9P1Q75LS8 142 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 TRABD2AQ86V40 505 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 OR7D4Q8NG98 312 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 RMND5BQ96G75 393 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 APOPT1Q96IL0 206 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 FEM1CQ96JP0 617 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 CLPTM1LQ96KA5 538 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 ZNF560Q96MR9 790 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 ZSCAN5AQ9BUG6 496 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 EFHD1Q9BUP0 239 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 APOL5Q9BWW9 433 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 RAVER2Q9HCJ3 691 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 GPRC5BQ9NZH0 403 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 PKD2L1Q9P0L9 805 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 CAB39Q9Y376 341 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 HCN4Q9Y3Q4 1203 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 KLF2Q9Y5W3 355 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
PRPF4B-206ENST00000481109 SF3B1O75533 1304 aaKnown RBP eCLIP10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 IGSF1Q8N6C5 1336 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 UBR1Q8IWV7 1749 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 MEI4A8MW99 385 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 EPHB6O15197 1021 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 OR7A10O76100 309 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 SLITRK5O94991 958 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 IFNA16P05015 189 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 PTX3P26022 381 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 GNA12Q03113 381 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 TEFQ10587 303 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 FAM47CQ5HY64 1035 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 USP50Q70EL3 339 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 LACC1Q8IV20 430 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 SLC25A41Q8N5S1 370 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 GIMAP8Q8ND71 665 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 SVIPQ8NHG7 77 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 TPCN2Q8NHX9 752 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 FIG4Q92562 907 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 AK8Q96MA6 479 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 HEXIM2Q96MH2 286 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 MOGAT1Q96PD6 335 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 TWNKQ96RR1 684 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 TMEM120AQ9BXJ8 343 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 ERVMER34-1Q9H9K5 563 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 CXorf21Q9HAI6 301 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 KCNK13Q9HB14 408 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 KMT5AQ9NQR1 393 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 SDHAF3Q9NRP4 125 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 PKD2L2Q9NZM6 624 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 DPP7Q9UHL4 492 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 ENPP5Q9UJA9 477 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 CDC14AQ9UNH5 594 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 GDAQ9Y2T3 454 aa10.66□□□□□ -0.7
PRPF4B-206ENST00000481109 FLT4P35916 1363 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms