RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 CCDC127Q96BQ5 260 aa11.14□□□□□ -0.63
APTX-222ENST00000478279 PIWIL1Q96J94 861 aaKnown RBP11.14□□□□□ -0.63
APTX-222ENST00000478279 NRSN2Q9GZP1 204 aa11.14□□□□□ -0.63
APTX-222ENST00000478279 LHX5Q9H2C1 402 aa11.14□□□□□ -0.63
APTX-222ENST00000478279 VRTNQ9H8Y1 702 aa11.14□□□□□ -0.63
APTX-222ENST00000478279 NMUR1Q9HB89 426 aa11.14□□□□□ -0.63
APTX-222ENST00000478279 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.14□□□□□ -0.63
APTX-222ENST00000478279 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
APTX-222ENST00000478279 MYLKQ15746 1914 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 A0A1B0GTQ1 180 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 MDM4O15151 490 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 TIMM44O43615 452 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 TSPAN3O60637 253 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 RFPL3O75679 317 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 STC2O76061 302 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 SEMA4FO95754 770 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 KLKB1P03952 638 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 CCDC130P13994 396 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 HOXD13P35453 343 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 TXLNAP40222 546 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 CLDN6P56747 220 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 MAP3K7CLP57077 242 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 IL9RQ01113 521 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 CYP24A1Q07973 514 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 TARDBPQ13148 414 aaKnown RBP eCLIP11.13□□□□□ -0.63
APTX-222ENST00000478279 CAMK2GQ13555 558 aaPredicted RBP11.13□□□□□ -0.63
APTX-222ENST00000478279 KCNT1Q5JUK3 1230 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 LAYNQ6UX15 382 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 SERPINA13PQ6UXR4 307 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 CCDC73Q6ZRK6 1079 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 BRAPQ7Z569 592 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 ADAT2Q7Z6V5 191 aaKnown RBP11.13□□□□□ -0.63
APTX-222ENST00000478279 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 RBBP8NLQ8NC74 664 aaPredicted RBP11.13□□□□□ -0.63
APTX-222ENST00000478279 SLC2A14Q8TDB8 520 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 FGF11Q92914 225 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 BIRC7Q96CA5 298 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 CIPCQ9C0C6 399 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 NUDT5Q9UKK9 219 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 COL5A1P20908 1838 aaPredicted RBP11.13□□□□□ -0.63
APTX-222ENST00000478279 PIEZO2Q9H5I5 2752 aa11.13□□□□□ -0.63
APTX-222ENST00000478279 ARID1BQ8NFD5 2236 aaPredicted RBP11.12□□□□□ -0.63
APTX-222ENST00000478279 A0A1W2PQH9 124 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 CYP26A1O43174 497 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 PHACTR2O75167 634 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 FSBPO95073 299 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 LDOC1O95751 146 aaPredicted RBP11.12□□□□□ -0.63
APTX-222ENST00000478279 BCAT1P54687 386 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 COG7P83436 770 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 BMT2Q1RMZ1 405 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 ZNF667Q5HYK9 610 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 TMEM215Q68D42 235 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 GPRIN1Q7Z2K8 1008 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 CRYBG2Q8N1P7 616 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 ZNF276Q8N554 614 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 XXYLT1Q8NBI6 393 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 SORCS1Q8WY21 1168 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 TMEM176AQ96HP8 235 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 CNDP2Q96KP4 475 aaKnown RBP11.12□□□□□ -0.63
APTX-222ENST00000478279 ORAI3Q9BRQ5 295 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 SLC2A11Q9BYW1 496 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 DCLK3Q9C098 648 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 BTBD1Q9H0C5 482 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
APTX-222ENST00000478279 AGPAT3Q9NRZ7 376 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 FBXO2Q9UK22 296 aaPredicted RBP11.12□□□□□ -0.63
APTX-222ENST00000478279 CLEC4EQ9ULY5 219 aa11.12□□□□□ -0.63
APTX-222ENST00000478279 SRPRBQ9Y5M8 271 aaKnown RBP11.12□□□□□ -0.63
APTX-222ENST00000478279 HHLA1C9JL84 531 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 ERVH48-1M5A8F1 160 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 CBX4O00257 560 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 VILLO15195 856 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 EIF3DO15371 548 aaKnown RBP eCLIP11.11□□□□□ -0.63
APTX-222ENST00000478279 TGFB1I1O43294 461 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 CYBBP04839 570 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 FAM200BP0CF97 657 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 STAT6P42226 847 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 PSEN1P49768 467 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 CYP2J2P51589 502 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 C21orf59P57076 290 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 RACK1P63244 317 aaKnown RBP11.11□□□□□ -0.63
APTX-222ENST00000478279 ARID5AQ03989 594 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 TLE3Q04726 772 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 ZBTB16Q05516 673 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 DNAJC3Q13217 504 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 ZNF699Q32M78 642 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 HES3Q5TGS1 186 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 FBXL19Q6PCT2 694 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 SCARA5Q6ZMJ2 495 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 TADA2BQ86TJ2 420 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 GATAD2AQ86YP4 633 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 C12orf29Q8N999 325 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 ZNF507Q8TCN5 953 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 HPS3Q969F9 1004 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 CLIC6Q96NY7 704 aa11.11□□□□□ -0.63
APTX-222ENST00000478279 ELF4Q99607 663 aaPredicted RBP11.11□□□□□ -0.63
APTX-222ENST00000478279 ACE2Q9BYF1 805 aaPredicted RBP11.11□□□□□ -0.63
APTX-222ENST00000478279 PANK2Q9BZ23 570 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms