RNA–Protein interactions for RNA: ENST00000478087.5

HPS1-211, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-211ENST00000478087 TRIP4Q15650 581 aaPredicted RBP13.61□□□□□ -0.23
HPS1-211ENST00000478087 GEN1Q17RS7 908 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 USP39Q53GS9 565 aaKnown RBP13.61□□□□□ -0.23
HPS1-211ENST00000478087 DENND1BQ6P3S1 775 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 TADA2BQ86TJ2 420 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 SIX6OS1Q8N1H7 587 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 ARHGAP18Q8N392 663 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 LOXL4Q96JB6 756 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 MIS12Q9H081 205 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 CD248Q9HCU0 757 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 CD93Q9NPY3 652 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 CACNA2D2Q9NY47 1150 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 CYTH4Q9UIA0 394 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 CKAP5Q14008 2032 aa13.61□□□□□ -0.23
HPS1-211ENST00000478087 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 GOLGA6L7A0A1B0GV03 622 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 PATE3B3GLJ2 98 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 PENKP01210 267 aaPredicted RBP13.6□□□□□ -0.23
HPS1-211ENST00000478087 FYNP06241 537 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 KRT5P13647 590 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 GABRG2P18507 467 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 NTSR1P30989 418 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 MPLP40238 635 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 P2RY2P41231 377 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 GCNT1Q02742 428 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 CETN1Q12798 172 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 STX1AQ16623 288 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
HPS1-211ENST00000478087 MAP7D1Q3KQU3 841 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 HSP90AA4PQ58FG1 418 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 PMS2CLQ68D20 193 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 ARMCX6Q7L4S7 300 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 SCUBE3Q8IX30 993 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 TMEFF1Q8IYR6 380 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 CHPFQ8IZ52 775 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 SORCS1Q8WY21 1168 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 CDK5RAP1Q96SZ6 601 aaKnown RBP13.6□□□□□ -0.23
HPS1-211ENST00000478087 POLMQ9NP87 494 aaPredicted RBP13.6□□□□□ -0.23
HPS1-211ENST00000478087 BCCIPQ9P287 314 aaKnown RBP eCLIP13.6□□□□□ -0.23
HPS1-211ENST00000478087 AJAP1Q9UKB5 411 aaPredicted RBP13.6□□□□□ -0.23
HPS1-211ENST00000478087 STRIP2Q9ULQ0 834 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 CNTN6Q9UQ52 1028 aa13.6□□□□□ -0.23
HPS1-211ENST00000478087 BCLAF3A2AJT9 711 aaKnown RBP13.59□□□□□ -0.23
HPS1-211ENST00000478087 BECN2A8MW95 431 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 ALDH1A2O94788 518 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 RHOBTB1O94844 696 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 HOXB2P14652 356 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 CHKAP35790 457 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 GPD2P43304 727 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 SGSHP51688 502 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 MFAP3P55082 362 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 ELF2Q15723 593 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 DPCR1Q3MIW9 517 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 HSF5Q4G112 596 aaPredicted RBP13.59□□□□□ -0.23
HPS1-211ENST00000478087 AASDHQ4L235 1098 aaPredicted RBP13.59□□□□□ -0.23
HPS1-211ENST00000478087 TMEM215Q68D42 235 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 RNF139Q8WU17 664 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 PIWIL1Q96J94 861 aaKnown RBP13.59□□□□□ -0.23
HPS1-211ENST00000478087 DCLK3Q9C098 648 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 NAT10Q9H0A0 1025 aaKnown RBP13.59□□□□□ -0.23
HPS1-211ENST00000478087 CNGB3Q9NQW8 809 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 ABCC13Q9NSE7 274 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 TJP2Q9UDY2 1190 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 ZNF510Q9Y2H8 683 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 KNL1Q8NG31 2342 aa13.59□□□□□ -0.23
HPS1-211ENST00000478087 SLC30A4O14863 429 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 CAVIN2O95810 425 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 PON1P27169 355 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 PTGER3P43115 390 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 DHPSP49366 369 aaPredicted RBP13.58□□□□□ -0.24
HPS1-211ENST00000478087 SYPL2Q5VXT5 272 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.24
HPS1-211ENST00000478087 RFWD3Q6PCD5 774 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 FAM217AQ8IXS0 508 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 SCML4Q8N228 414 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 CPXM2Q8N436 756 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 C12orf50Q8NA57 414 aaPredicted RBP13.58□□□□□ -0.24
HPS1-211ENST00000478087 ADAM32Q8TC27 787 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 NETO1Q8TDF5 533 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 IPO4Q8TEX9 1081 aaKnown RBP13.58□□□□□ -0.24
HPS1-211ENST00000478087 DDI1Q8WTU0 396 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 ZNF606Q8WXB4 792 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 PLD4Q96BZ4 506 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 RTKNQ9BST9 563 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 THAP9Q9H5L6 903 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 SIX2Q9NPC8 291 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 ST7Q9NRC1 585 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 OLA1Q9NTK5 396 aaKnown RBP13.58□□□□□ -0.24
HPS1-211ENST00000478087 TMEM74BQ9NUR3 256 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 CALCOCO1Q9P1Z2 691 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 NAALADL1Q9UQQ1 740 aa13.58□□□□□ -0.24
HPS1-211ENST00000478087 PCNX2A6NKB5 2137 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms