RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 KCNJ12Q14500 433 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 GRM4Q14833 912 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 ZNF569Q5MCW4 686 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 TMEM63BQ5T3F8 832 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 DPY19L3Q6ZPD9 716 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 PTCHD4Q6ZW05 846 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 RAB11FIP2Q7L804 512 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 CLASRPQ8N2M8 674 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 CTHRC1Q96CG8 243 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 ZSCAN31Q96LW9 406 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 SNX18Q96RF0 628 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 PABPC3Q9H361 631 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 PRDM8Q9NQV8 689 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 RXFP3Q9NSD7 469 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 KIF17Q9P2E2 1029 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 PCSK5Q92824 1860 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 CCDC189A1A4V9 331 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 LINC01548A6NM66 108 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 DHHO43323 396 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 FGAP02671 866 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 GYS1P13807 737 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 VEGFAP15692 232 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 KLRK1P26718 216 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 CST5P28325 142 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 BFSP2Q13515 415 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 ADCK5Q3MIX3 580 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 AASDHQ4L235 1098 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 L1TD1Q5T7N2 865 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 ANKRD45Q5TZF3 282 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 LIN54Q6MZP7 749 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 CCDC144NLQ6NUI1 221 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 NFRKBQ6P4R8 1299 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 KIRREL2Q6UWL6 708 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 TRIM72Q6ZMU5 477 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 KRT27Q7Z3Y8 459 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 TERB1Q8NA31 727 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 SEMA6DQ8NFY4 1073 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 OR1N1Q8NGS0 311 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 GCC1Q96CN9 775 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 DAZAP1Q96EP5 407 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 WDYHV1Q96HA8 205 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 CINPQ9BW66 212 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 TAF1DQ9H5J8 278 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 MLXIPQ9HAP2 919 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 SEPSECSQ9HD40 501 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 FSCN3Q9NQT6 498 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 ITM2CQ9NQX7 267 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 FBXO28Q9NVF7 368 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 TFCP2L1Q9NZI6 479 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 SH3BP4Q9P0V3 963 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 LPAR3Q9UBY5 353 aa5.27□□□□□ -1.57
SMNDC1-205ENST00000477763 LARGE1O95461 756 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 CER1O95813 267 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 PRKCGP05129 697 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 C21orf58P58505 322 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 TFF2Q03403 129 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 RPS6KA2Q15349 733 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 TAF5Q15542 800 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 TRIM60Q495X7 471 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 RNASE12Q5GAN4 147 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 GRHL2Q6ISB3 625 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 NAPRTQ6XQN6 538 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 PIK3AP1Q6ZUJ8 805 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 TRABD2AQ86V40 505 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 PNPLA1Q8N8W4 532 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM71DQ8N9W8 422 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 OR6Y1Q8NGX8 325 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 SCAMP5Q8TAC9 235 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 TRAPPC9Q96Q05 1148 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 DDX23Q9BUQ8 820 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 SRP68Q9UHB9 627 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 C19orf53Q9UNZ5 99 aaPredicted RBP5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 GPR52Q9Y2T5 361 aa5.26□□□□□ -1.57
SMNDC1-205ENST00000477763 WIPF3A6NGB9 483 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 MASP2O00187 686 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 CTIFO43310 598 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 TMIGD3P0DMS9 266 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 MCM5P33992 734 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 PNLIPRP1P54315 467 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 TXNL4AP83876 142 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 PSG6Q00889 435 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 CCDC15Q0P6D6 951 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 SLC10A2Q12908 348 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 DNASE1L3Q13609 305 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 CBFBQ13951 182 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 CCDC142Q17RM4 750 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 PROSER3Q2NL68 480 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 KIAA1614Q5VZ46 1190 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM90A2PQ658T7 463 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 MSANTD2Q6P1R3 559 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 MOGAT3Q86VF5 341 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 HMGB4Q8WW32 186 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 CPT1BQ92523 772 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 C3orf49Q96BT1 292 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 SDCCAG3Q96C92 435 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 MACROD1Q9BQ69 325 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 PAAF1Q9BRP4 392 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 CIPCQ9C0C6 399 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms