RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 SH3TC2Q8TF17 1288 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PIF1Q9H611 641 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PDLIM7Q9NR12 457 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 GPRC5DQ9NZD1 345 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PPEF2O14830 753 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 STAG3L1P0CL83 205 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 IREB2P48200 963 aaKnown RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 PAPOLAP51003 745 aaKnown RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 MRPS22P82650 360 aaKnown RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 SURF1Q15526 300 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 NRF1Q16656 503 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PPP1R2P3Q6NXS1 205 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PAOXQ6QHF9 649 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 ICA1LQ8NDH6 482 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PHC3Q8NDX5 983 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 NRG4Q8WWG1 115 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 ATP2A3Q93084 1043 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PEBP4Q96S96 227 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 GTSE1Q9NYZ3 720 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 SLC39A10Q9ULF5 831 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 TPP1O14773 563 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 SPTLC1O15269 473 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 METTL18O95568 372 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 GPD1P21695 349 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 ETFBP38117 255 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 CCNFP41002 786 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 TCEAL1Q15170 157 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 C15orf39Q6ZRI6 1047 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 IFNEQ86WN2 208 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 HASPINQ8TF76 798 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 C12orf42Q96LP6 360 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 SHOC2Q9UQ13 582 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 SNX10Q9Y5X0 201 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 MYH9P35579 1960 aaKnown RBP10.08□□□□□ -0.8
CMC1-209ENST00000477739 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 CLDN5O00501 218 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 ATP5HO75947 161 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 ASS1P00966 412 aaKnown RBP10.08□□□□□ -0.8
CMC1-209ENST00000477739 RARBP10826 455 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 SP100P23497 879 aaPredicted RBP10.08□□□□□ -0.8
CMC1-209ENST00000477739 AP3M2P53677 418 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 SLC34A1Q06495 639 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 PDE1CQ14123 709 aaPredicted RBP10.08□□□□□ -0.8
CMC1-209ENST00000477739 PCSK7Q16549 785 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 HSP90AA5PQ58FG0 334 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 ZPBP2Q6X784 338 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 LBX2Q6XYB7 198 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 CEP128Q6ZU80 1094 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 PHF13Q86YI8 300 aaPredicted RBP10.08□□□□□ -0.8
CMC1-209ENST00000477739 C12orf50Q8NA57 414 aaPredicted RBP10.08□□□□□ -0.8
CMC1-209ENST00000477739 VCPIP1Q96JH7 1222 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 ELOVL4Q9GZR5 314 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 C2orf40Q9H1Z8 148 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 ACSS3Q9H6R3 686 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 XAB2Q9HCS7 855 aaKnown RBP10.08□□□□□ -0.8
CMC1-209ENST00000477739 ETNK2Q9NVF9 386 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 AGRPO00253 132 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 MED7O43513 233 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 MAFO75444 373 aaPredicted RBP10.08□□□□□ -0.8
CMC1-209ENST00000477739 OR6B1O95007 311 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 EPHA3P29320 983 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 BLMHQ13867 455 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 ZNF460Q14592 562 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 ATG16L1Q676U5 607 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 CYP2R1Q6VVX0 501 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 UTS2BQ765I0 119 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 SLC26A11Q86WA9 606 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 EDEM1Q92611 657 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 APOPT1Q96IL0 206 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 CATSPER2Q96P56 530 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 NUF2Q9BZD4 464 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 C20orf27Q9GZN8 174 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 SDCBP2Q9H190 292 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 CXCL16Q9H2A7 254 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 TMEM134Q9H6X4 195 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 PRKAG3Q9UGI9 489 aa10.08□□□□□ -0.8
CMC1-209ENST00000477739 STX16-NPEPL1H3BU86 382 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 USP2O75604 605 aaPredicted RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 ARSAP15289 507 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 GOT1P17174 413 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 CYP2F1P24903 491 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 PEX2P28328 305 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 AP2B1P63010 937 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 MOGSQ13724 837 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 TMEM198Q66K66 360 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 KBTBD2Q8IY47 623 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ULK2Q8IYT8 1036 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ARFGAP1Q8N6T3 406 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ZNF483Q8TF39 744 aaPredicted RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 TSNARE1Q96NA8 513 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 TUBGCP5Q96RT8 1024 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 PCYT2Q99447 389 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ACO2Q99798 780 aaKnown RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 SNRNP25Q9BV90 132 aaKnown RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 WWP1Q9H0M0 922 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 DDX56Q9NY93 547 aaKnown RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 ZNF112Q9UJU3 913 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 STRIP2Q9ULQ0 834 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 PSAT1Q9Y617 370 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 CAPN8A6NHC0 703 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms