RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 USP28Q96RU2 1077 aa5.77□□□□□ -1.49
VPS45-207ENST00000477558 FTOQ9C0B1 505 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS45-207ENST00000477558 HAPLN2Q9GZV7 340 aa5.77□□□□□ -1.49
VPS45-207ENST00000477558 XPNPEP1Q9NQW7 623 aa5.77□□□□□ -1.49
VPS45-207ENST00000477558 ANKEF1Q9NU02 776 aa5.77□□□□□ -1.49
VPS45-207ENST00000477558 FBXO2Q9UK22 296 aaPredicted RBP5.77□□□□□ -1.49
VPS45-207ENST00000477558 TRHDEQ9UKU6 1024 aa5.77□□□□□ -1.49
VPS45-207ENST00000477558 MYH11P35749 1972 aa5.77□□□□□ -1.49
VPS45-207ENST00000477558 RALGAPA2Q2PPJ7 1873 aa5.77□□□□□ -1.49
VPS45-207ENST00000477558 SPTBN5Q9NRC6 3674 aaKnown RBP5.76□□□□□ -1.49
VPS45-207ENST00000477558 KIAA1671Q9BY89 1806 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 PP2D1A8MPX8 630 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 RSPH10B2B2RC85 870 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 ALG1L2C9J202 215 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 K7ESF4 209 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 PRICKLE3O43900 615 aaPredicted RBP5.76□□□□□ -1.49
VPS45-207ENST00000477558 H2AFYO75367 372 aaKnown RBP5.76□□□□□ -1.49
VPS45-207ENST00000477558 YEATS4O95619 227 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 RSPH10BP0C881 870 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 ENPP1P22413 925 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 CNR2P34972 360 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 THPOP40225 353 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 BUD31P41223 144 aaPredicted RBP5.76□□□□□ -1.49
VPS45-207ENST00000477558 TECP42680 631 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 FXR1P51114 621 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS45-207ENST00000477558 CCL23P55773 120 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 NPEPPSP55786 919 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 CYP4A11Q02928 519 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 CTTNQ14247 550 aaKnown RBP5.76□□□□□ -1.49
VPS45-207ENST00000477558 ACAP1Q15027 740 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 SLC39A14Q15043 492 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 TMEM119Q4V9L6 283 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 ATL3Q6DD88 541 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 FAM173BQ6P4H8 233 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 TSHZ1Q6ZSZ6 1077 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 ZNF365Q70YC5 407 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 GAREM2Q75VX8 874 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 NME8Q8N427 588 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 USP38Q8NB14 1042 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 LINC00301Q8NCQ3 95 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 DNAJB3Q8WWF6 145 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 GAB3Q8WWW8 586 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 AK8Q96MA6 479 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 ACAP3Q96P50 834 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 LBHD1Q9BQE6 289 aaPredicted RBP5.76□□□□□ -1.49
VPS45-207ENST00000477558 KCTD10Q9H3F6 313 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 NRBP2Q9NSY0 501 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS45-207ENST00000477558 PRSS50Q9UI38 385 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 TRPV2Q9Y5S1 764 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 CLIC4Q9Y696 253 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 CDY2AQ9Y6F7 541 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 COL4A4P53420 1690 aaPredicted RBP5.76□□□□□ -1.49
VPS45-207ENST00000477558 FNDC1Q4ZHG4 1894 aaPredicted RBP5.76□□□□□ -1.49
VPS45-207ENST00000477558 ATG2AQ2TAZ0 1938 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 NLRC5Q86WI3 1866 aa5.76□□□□□ -1.49
VPS45-207ENST00000477558 ABHD14A-ACY1A0A1B0GW23 586 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 GABRDO14764 452 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 PPP6R2O75170 966 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 HOXA5P20719 270 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 LONP1P36776 959 aaKnown RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 MEOX1P50221 254 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 GPC3P51654 580 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 CLCN3P51790 818 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 CRYBB1P53674 252 aaPredicted RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 POU5F1BQ06416 359 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 KLF1Q13351 362 aaPredicted RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 EMC2Q15006 297 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 RNF151Q2KHN1 245 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 TMEM266Q2M3C6 531 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 INAVAQ3KP66 663 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 BORAQ6PGQ7 559 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 KCNK18Q7Z418 384 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 RSPH3Q86UC2 560 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 ZNF410Q86VK4 478 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 EXOC8Q8IYI6 725 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 LGI4Q8N135 537 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 CDYL2Q8N8U2 506 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 APBB2Q92870 758 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 HIST1H2AHQ96KK5 128 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 WDR92Q96MX6 357 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 HIST1H2AJQ99878 128 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 JPH2Q9BR39 696 aaPredicted RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 FDXACB1Q9BRP7 624 aaPredicted RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 NFKBIZQ9BYH8 718 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 RAB34Q9BZG1 259 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 CCSER1Q9C0I3 900 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 QRSL1Q9H0R6 528 aaKnown RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 AGO3Q9H9G7 860 aaKnown RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 ERVK-5Q9HDB9 667 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 BLOC1S4Q9NUP1 217 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 POLR3BQ9NW08 1133 aaPredicted RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 LRWD1Q9UFC0 647 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 SRPRBQ9Y5M8 271 aaKnown RBP5.75□□□□□ -1.49
VPS45-207ENST00000477558 A0A0C4DFX4 3053 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 MYO9BQ13459 2157 aa5.75□□□□□ -1.49
VPS45-207ENST00000477558 VWA3AA6NCI4 1184 aa5.74□□□□□ -1.49
VPS45-207ENST00000477558 C2orf78A6NCI8 922 aa5.74□□□□□ -1.49
VPS45-207ENST00000477558 FGBP02675 491 aa5.74□□□□□ -1.49
VPS45-207ENST00000477558 VTNP04004 478 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms