RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 HASPINQ8TF76 798 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 WDR60Q8WVS4 1066 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 CCT6BQ92526 530 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 MCRS1Q96EZ8 462 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 CCDC17Q96LX7 622 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 FYTTD1Q96QD9 318 aaKnown RBP3.83□□□□□ -1.8
TARDBP-208ENST00000477447 CRAMP1Q96RY5 1269 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 RTKNQ9BST9 563 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 ADGRE3Q9BY15 652 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 FZD4Q9ULV1 537 aa3.83□□□□□ -1.8
TARDBP-208ENST00000477447 UBE2J1Q9Y385 318 aaPredicted RBP3.83□□□□□ -1.8
TARDBP-208ENST00000477447 AOX1Q06278 1338 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 TCRBV5S1A1TA0A578 114 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 GXYLT2A0PJZ3 443 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 LINC01548A6NM66 108 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 KIF28PB7ZC32 967 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 TISP43B9A030 160 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 BTBD19C9JJ37 291 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 TMEM232C9JQI7 657 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 CLIC1O00299 241 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 PPP6R2O75170 966 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 SLC3A2P08195 630 aaKnown RBP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 MATN1P21941 496 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 WDR5P61964 334 aaKnown RBP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 RNASELQ05823 741 aaKnown RBP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 SF3A3Q12874 501 aaKnown RBP eCLIP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 TIGD6Q17RP2 521 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 ATPAF1Q5TC12 328 aaPredicted RBP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 ANKRD40Q6AI12 368 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 VSTM1Q6UX27 236 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 C16orf89Q6UX73 402 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 TRABD2AQ86V40 505 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 CHSY1Q86X52 802 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 DNAJC10Q8IXB1 793 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 OR52L2PQ8NGH6 319 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 ADAMTS18Q8TE60 1221 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 EID2BQ96D98 161 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 HIC2Q96JB3 615 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 PAGR1Q9BTK6 254 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 SORBS1Q9BX66 1292 aaKnown RBP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 MLXIPQ9HAP2 919 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 ABHD10Q9NUJ1 306 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 HERC5Q9UII4 1024 aaKnown RBP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 PCDHB7Q9Y5E2 793 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 COX11Q9Y6N1 276 aa3.82□□□□□ -1.8
TARDBP-208ENST00000477447 MORC2Q9Y6X9 1032 aaPredicted RBP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 ARHGEF17Q96PE2 2063 aaPredicted RBP3.82□□□□□ -1.8
TARDBP-208ENST00000477447 ARID4BQ4LE39 1312 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 H3BNC9 293 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 M0QYT0 321 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 PPFIA2O75334 1257 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 CHRM5P08912 532 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 CYP2D6P10635 497 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 VEGFAP15692 232 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 HALP42357 657 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 GRK6P43250 576 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 NANOS3P60323 173 aaKnown RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 AP2B1P63010 937 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 TFF2Q03403 129 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 SLC10A2Q12908 348 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 SLC14A1Q13336 389 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 PRKG1Q13976 671 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 KPNB1Q14974 876 aaKnown RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 CNGA3Q16281 694 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 ZNF782Q6ZMW2 699 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 RAB11FIP2Q7L804 512 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 PTF1AQ7RTS3 328 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 SLC44A2Q8IWA5 706 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 CCDC117Q8IWD4 279 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 ANKRD42Q8N9B4 389 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 STT3BQ8TCJ2 826 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 TRAPPC12Q8WVT3 735 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 HMGB4Q8WW32 186 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 NPIPB3Q92617 1050 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 AKAP1Q92667 903 aaKnown RBP eCLIP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 KAZALD1Q96I82 304 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 REXO5Q96IC2 774 aaKnown RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 FAR2Q96K12 515 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 ASB2Q96Q27 587 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 PAAF1Q9BRP4 392 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 BRD8Q9H0E9 1235 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 MYLK2Q9H1R3 596 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 PABPC3Q9H361 631 aaKnown RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 CDCP1Q9H5V8 836 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 CCDC134Q9H6E4 229 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 AGO4Q9HCK5 861 aaKnown RBP3.81□□□□□ -1.8
TARDBP-208ENST00000477447 NFU1Q9UMS0 254 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 RIPOR2Q9Y4F9 1068 aa3.81□□□□□ -1.8
TARDBP-208ENST00000477447 FAM90A18PA6NE21 464 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 FAM90A16PA6NEW6 464 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 HMX3A6NHT5 357 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 FAM90A9PA6NNJ1 464 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 FAM90A5PA8MXJ8 464 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 PRRT4C9JH25 899 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 IPO5O00410 1097 aaKnown RBP3.8□□□□□ -1.8
TARDBP-208ENST00000477447 RNF8O76064 485 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 PRKCGP05129 697 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 FAM90A15PP0C7V4 464 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 FAM90A14PP0C7W9 464 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 CYP2A6P11509 494 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms