RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 WDR49Q8IV35 697 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 CYP4Z2PQ8N1L4 340 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 UTP15Q8TED0 518 aaKnown RBP19.06■□□□□ 0.64
VARS2-209ENST00000477288 CELF6Q96J87 481 aaKnown RBP19.06■□□□□ 0.64
VARS2-209ENST00000477288 SH3GL1Q99961 368 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 NUDT14O95848 222 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 ELAVL2Q12926 359 aaKnown RBP19.06■□□□□ 0.64
VARS2-209ENST00000477288 GRIK4Q16099 956 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 OVOS1Q6IE37 1185 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 ILDR2Q71H61 639 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 CDK20Q8IZL9 346 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 TDRD5Q8NAT2 981 aaKnown RBP19.06■□□□□ 0.64
VARS2-209ENST00000477288 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.06■□□□□ 0.64
VARS2-209ENST00000477288 DAGLBQ8NCG7 672 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 FAM120BQ96EK7 910 aaKnown RBP19.06■□□□□ 0.64
VARS2-209ENST00000477288 SERHL2Q9H4I8 314 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 SERHLQ9NQF3 203 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 KANSL3Q9P2N6 904 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 AKAP5P24588 427 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 FBXO47Q5MNV8 452 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 PCNX4Q63HM2 1172 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 CASKIN2Q8WXE0 1202 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 SPACA7Q96KW9 195 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 NKRFO15226 690 aaKnown RBP eCLIP19.06■□□□□ 0.64
VARS2-209ENST00000477288 MT-CO1P00395 513 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 HIRAP54198 1017 aaPredicted RBP19.06■□□□□ 0.64
VARS2-209ENST00000477288 SOX10P56693 466 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 FAM171A1Q5VUB5 890 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 ACTR8Q9H981 624 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 SH3BP4Q9P0V3 963 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 AP4S1Q9Y587 144 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 TRIM66O15016 1216 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 TALDO1P37837 337 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 EMC1Q8N766 993 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 CSGALNACT1Q8TDX6 532 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 AGO4Q9HCK5 861 aaKnown RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 PCDHGA4Q9Y5G9 962 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 H3BRB1 525 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 ENO2P09104 434 aaPredicted RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 PSMC6P62333 389 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 ACOX1Q15067 660 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 NFE2Q16621 373 aaPredicted RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 NLRP9Q7RTR0 991 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 TUT1Q9H6E5 874 aaKnown RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 POLR1DQ9Y2S0 133 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 DOK6Q6PKX4 331 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 COL23A1Q86Y22 540 aaPredicted RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 RNASE11Q8TAA1 199 aaKnown RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 RXFP2Q8WXD0 754 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 SYT15Q9BQS2 421 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 CISHQ9NSE2 258 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 ADAM30Q9UKF2 790 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 NRXN1Q9ULB1 1477 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 AMHP03971 560 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 PPP4CP60510 307 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 IL5RAQ01344 420 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 PKN2Q16513 984 aaKnown RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 ZCCHC8Q6NZY4 707 aaKnown RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 NLNQ9BYT8 704 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 MFSD1Q9H3U5 465 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 TBC1D13Q9NVG8 400 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 MRPL39Q9NYK5 338 aaKnown RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 ACAT1P24752 427 aaKnown RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 NUP107P57740 925 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 RSBN1Q5VWQ0 802 aaPredicted RBP19.05■□□□□ 0.64
VARS2-209ENST00000477288 ADI1Q9BV57 179 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 PHACTR1Q9C0D0 580 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 FAM153AQ9UHL3 310 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 SPATA2Q9UM82 520 aa19.05■□□□□ 0.64
VARS2-209ENST00000477288 IGFBP4P22692 258 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 AQP5P55064 265 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 PRKAA1Q13131 559 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 GATAD2AQ86YP4 633 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 ZDHHC15Q96MV8 337 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 PRRG3Q9BZD7 231 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 KLHL1Q9NR64 748 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 TRIM24O15164 1050 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 KIF1CO43896 1103 aaKnown RBP19.04■□□□□ 0.64
VARS2-209ENST00000477288 GHRP10912 638 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 PEX5P50542 639 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 TBX4P57082 545 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 NR6A1Q15406 480 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 CBWD3Q5JTY5 395 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 CBWD5Q5RIA9 395 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 HLA-DQA1Q5Y7H0 255 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 FAM45BPQ6NSW5 357 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 TXNRD3Q86VQ6 643 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 SCUBE1Q8IWY4 988 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 GINS4Q9BRT9 223 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 TMEM121Q9BTD3 319 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 FAM20BO75063 409 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 FDPSP14324 419 aaKnown RBP19.04■□□□□ 0.64
VARS2-209ENST00000477288 GSSP48637 474 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 CYP24A1Q07973 514 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 FNDC3BQ53EP0 1204 aaKnown RBP19.04■□□□□ 0.64
VARS2-209ENST00000477288 FAM9CQ8IZT9 166 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 C3orf20Q8ND61 904 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 FIG4Q92562 907 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 LOC102724159A0A0B4J2E5 919 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 MAGEA13PA6NCF6 341 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms