RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 RPAP3Q9H6T3 665 aaPredicted RBP4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 KAT14Q9H8E8 782 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 NOD2Q9HC29 1040 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 NRIP3Q9NQ35 241 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 DDX21Q9NR30 783 aaKnown RBP eCLIP4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 SLC5A4Q9NY91 659 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 UBAP1Q9NZ09 502 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 CTTNBP2NLQ9P2B4 639 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 CPSF1Q10570 1443 aaKnown RBP4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 SSH2Q76I76 1423 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 ADGRL3Q9HAR2 1447 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 PDS5BQ9NTI5 1447 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 PCF11O94913 1555 aaKnown RBP4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 CDC42BPAQ5VT25 1732 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 ABCC11Q96J66 1382 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 PIK3R4Q99570 1358 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 WDR62O43379 1518 aa4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 CDK13Q14004 1512 aaKnown RBP4.77□□□□□ -1.65
PIKFYVE-209ENST00000477200 GRIN2DO15399 1336 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 CNTNAP2Q9UHC6 1331 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 NRXN1Q9ULB1 1477 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 TMEM247A6NEH6 219 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 GCOM1H8Y6P7 765 aaPredicted RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 KIAA0391O15091 583 aaKnown RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 LSM1O15116 133 aaKnown RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 PFDN1O60925 122 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 GPR32O75388 356 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 PARNO95453 639 aaKnown RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 SYF2O95926 243 aaKnown RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ALADP13716 330 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 PPP3CBP16298 524 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 POLR2EP19388 210 aaKnown RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 HOXD12P35452 270 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 MCAMP43121 646 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 PMS2P54278 862 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 GNGT1P63211 74 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 PPIDQ08752 370 aaKnown RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 MYO1EQ12965 1108 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 STIM1Q13586 685 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 DYRK1AQ13627 763 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 STX1AQ16623 288 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 SLC44A4Q53GD3 710 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 BOLA3Q53S33 107 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ADALQ6DHV7 355 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 SUMO4Q6EEV6 95 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 KCNK18Q7Z418 384 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 NANOGNBQ7Z5D8 188 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ZNF554Q86TJ5 538 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 SPATA3Q8NHX4 192 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ACMSDQ8TDX5 336 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 COG1Q8WTW3 980 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 NCSTNQ92542 709 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ATP6V0A1Q93050 837 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 SLC39A3Q9BRY0 314 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 NUP58Q9BVL2 599 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ACE2Q9BYF1 805 aaPredicted RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 SEZ6LQ9BYH1 1024 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 PUS3Q9BZE2 481 aaKnown RBP4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 SIL1Q9H173 461 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ANKZF1Q9H8Y5 726 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 ANO10Q9NW15 660 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 IL20Q9NYY1 176 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 SEL1LQ9UBV2 794 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 CDC23Q9UJX2 597 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 TBC1D30Q9Y2I9 924 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 C2CD2Q9Y426 696 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 KIF24Q5T7B8 1368 aa4.76□□□□□ -1.65
PIKFYVE-209ENST00000477200 FANCAO15360 1455 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 IQGAP2Q13576 1575 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 BTBD19C9JJ37 291 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 DIAPH2O60879 1101 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 N4BP1O75113 896 aaKnown RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 ENDOD1O94919 500 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 ANP32DO95626 131 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 FAM107AO95990 144 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 GNAI3P08754 354 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 PDGFRBP09619 1106 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 PDHBP11177 359 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 MYCLP1P12525 358 aaPredicted RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 CCNCP24863 283 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 SLC6A4P31645 630 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 S100A5P33763 92 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 MLH1P40692 756 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 BCL2A1Q16548 175 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 TRIM71Q2Q1W2 868 aaKnown RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 RNF187Q5TA31 235 aaPredicted RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 ALS2CLQ60I27 953 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 GALNT17Q6IS24 598 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 C3orf62Q6ZUJ4 267 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 CACNA2D4Q7Z3S7 1137 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 ERICH1Q86X53 443 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 CCAR1Q8IX12 1150 aaKnown RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 SLC15A3Q8IY34 581 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 ARFGAP2Q8N6H7 521 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 GDAP1Q8TB36 358 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 DENND1AQ8TEH3 1009 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 DIS3LQ8TF46 1054 aaKnown RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 TGFBRAP1Q8WUH2 860 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 KIFAP3Q92845 792 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms