RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 TCRBV7S3A2A0A539 114 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 SYN3O14994 580 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 RIPK2O43353 540 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 HOXA2O43364 376 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CLTBP09497 229 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 SRGAP2BP0DMP2 458 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 HPDP32754 393 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 ATP1A2P50993 1020 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 USP46P62068 366 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 TERF2Q15554 542 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 NFE2Q16621 373 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 KCNT2Q6UVM3 1135 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 RNF19BQ6ZMZ0 732 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 TAC4Q86UU9 113 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CCDC110Q8TBZ0 833 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 LGMNQ99538 433 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CRISPLD1Q9H336 500 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CDY1Q9Y6F8 540 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 USP3Q9Y6I4 520 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 NUP205Q92621 2012 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 A0A1W2PQH9 124 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 EEF2KO00418 725 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 TNFRSF10BO14763 440 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 ADAM12O43184 909 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 STIP1P31948 543 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 ACTN2P35609 894 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 FASTKD3Q14CZ7 662 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 KIAA1841Q6NSI8 718 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 FBXO46Q6PJ61 603 aaPredicted RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 OTOP2Q7RTS6 562 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 BBOF1Q8ND07 529 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 CCNYQ8ND76 341 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 CCHCR1Q8TD31 782 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 DQX1Q8TE96 717 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 VWCEQ96DN2 955 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 TTPALQ9BTX7 342 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 MRPL9Q9BYD2 267 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 CEP41Q9BYV8 373 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 USP29Q9HBJ7 922 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 SAYSD1Q9NPB0 183 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 ARHGEF4Q9NR80 690 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 DTLQ9NZJ0 730 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 FBXW11Q9UKB1 542 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 MAGED2Q9UNF1 606 aaPredicted RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 GOLGA8KD6RF30 607 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 TBX18O95935 607 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 MOCS2O96007 188 aaPredicted RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 RAG1P15918 1043 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 TGM2P21980 687 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 FGFR3P22607 806 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 GJA8P48165 433 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 LMAN1P49257 510 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 DEFB103AP81534 67 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 CAV1Q03135 178 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 RNASEH2BQ5TBB1 312 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 NCBP2-AS2Q69YL0 99 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 SCD5Q86SK9 330 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 NUP93Q8N1F7 819 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 LRRC43Q8N309 656 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 FAM76AQ8TAV0 307 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 CPT1BQ92523 772 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 CASP10Q92851 521 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 C11orf49Q9H6J7 331 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 RAB6BQ9NRW1 208 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 OSER1Q9NX31 292 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 OR12D3Q9UGF7 316 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 NOVA2Q9UNW9 492 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 VWA8A3KMH1 1905 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 TRIM43BA6NCK2 446 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 DGKIO75912 1065 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 CSPG5O95196 566 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 OR1D2P34982 312 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 AP1B1Q10567 949 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 LONRF1Q17RB8 773 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 ARL13BQ3SXY8 428 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 BNIPLQ7Z465 357 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 TRIM43Q96BQ3 446 aaPredicted RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 FAF2Q96CS3 445 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 MRRFQ96E11 262 aaKnown RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 FRMD8P1Q9BZ68 369 aaPredicted RBP6.87□□□□□ -1.31
CCDC30-209ENST00000477155 TMBIM4Q9HC24 238 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 ABCC13Q9NSE7 274 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 SEPT10Q9P0V9 454 aa6.87□□□□□ -1.31
CCDC30-209ENST00000477155 ZNF638Q14966 1978 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 H3BRJ5 948 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 MFSD11O43934 449 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 PIAS1O75925 651 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 F9P00740 461 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 ERCC2P18074 760 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 EPHB2P29323 1055 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 MAGEA4P43358 317 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TPI1P60174 286 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 PDIA2Q13087 525 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 RWDD4Q6NW29 188 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 CNKSR3Q6P9H4 555 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms