RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 NPC1O15118 1278 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CYP26A1O43174 497 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 AP1G2O75843 785 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 BEST1O76090 585 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CCDC130P13994 396 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 TNNI1P19237 187 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 OXTRP30559 389 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 IL12RB1P42701 662 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 ABCG1P45844 678 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 GCGRP47871 477 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF132P52740 706 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 COPAP53621 1224 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CDH8P55286 799 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 MYL6P60660 151 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CYP24A1Q07973 514 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 ENPP2Q13822 863 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 PSMD6Q15008 389 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 GEN1Q17RS7 908 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 FYB2Q5VWT5 728 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 GPRIN1Q7Z2K8 1008 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CACUL1Q86Y37 369 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 RDH13Q8NBN7 331 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 ZMIZ2Q8NF64 920 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 RHBDD1Q8TEB9 315 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 HPS3Q969F9 1004 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 THAP11Q96EK4 314 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 SIPA1Q96FS4 1042 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CLIC6Q96NY7 704 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CGRRF1Q99675 332 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 SMOQ99835 787 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 KLF16Q9BXK1 252 aaPredicted RBP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 NACA2Q9H009 215 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 SDCBP2Q9H190 292 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 VRTNQ9H8Y1 702 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 KIAA1586Q9HCI6 787 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CSNK1G1Q9HCP0 422 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CYLDQ9NQC7 956 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 ITM2CQ9NQX7 267 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 TLR8Q9NR97 1041 aaKnown RBP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 OSER1Q9NX31 292 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 PLK2Q9NYY3 685 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 THAP10Q9P2Z0 257 aaPredicted RBP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 NXF1Q9UBU9 619 aaKnown RBP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CCDC39Q9UFE4 941 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 EIF2B4Q9UI10 523 aaKnown RBP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 LSM7Q9UK45 103 aaKnown RBP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 SLC27A6Q9Y2P4 619 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 SRPRBQ9Y5M8 271 aaKnown RBP5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CLIC4Q9Y696 253 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 PTPN13Q12923 2485 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 CKAP5Q14008 2032 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 SPENQ96T58 3664 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 MDM4O15151 490 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ATXN7O15265 892 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 EIF3DO15371 548 aaKnown RBP eCLIP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 TGFB1I1O43294 461 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 TNFSF14O43557 240 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 PCDHGA12O60330 932 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 STC2O76061 302 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 CD2BP2O95400 341 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 PENKP01210 267 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 KLKB1P03952 638 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 PLA2G2AP14555 144 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ACO1P21399 889 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 PRKCHP24723 683 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ITPKBP27987 946 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ATICP31939 592 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ATP5C1P36542 298 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 TXLNAP40222 546 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 STAT6P42226 847 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 GRK6P43250 576 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 CSNK1EP49674 416 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 AFF3P51826 1226 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 MFAP3P55082 362 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 MAP3K7CLP57077 242 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 GOLGA8FQ08AF8 430 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 GOLGA8DPQ0D2H9 430 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 TRPC3Q13507 836 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF234Q14588 700 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 RABEP1Q15276 862 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 KIF19Q2TAC6 998 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF699Q32M78 642 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 LARP1BQ659C4 914 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 KLHDC10Q6PID8 442 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 DHRS13Q6UX07 377 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 LAYNQ6UX15 382 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 SCARA5Q6ZMJ2 495 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 CCDC73Q6ZRK6 1079 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 STXBP4Q6ZWJ1 553 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 EPM2AIP1Q7L775 607 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ACOT1Q86TX2 421 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 TMPRSS6Q8IU80 811 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 CCDC65Q8IXS2 484 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 RBBP8NLQ8NC74 664 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 PIP4K2CQ8TBX8 421 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 SLC2A14Q8TDB8 520 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 PRCCQ92733 491 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 IGSF8Q969P0 613 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms