RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 SLC6A18Q96N87 628 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 SEMA3CQ99985 751 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 FBRSQ9HAH7 460 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 TMEM30AQ9NV96 361 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 MAN2B2Q9Y2E5 1009 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 CENPEQ02224 2701 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 KIF26BQ2KJY2 2108 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 PP2D1A8MPX8 630 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 REC8O95072 547 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 PENKP01210 267 aaPredicted RBP11.1□□□□□ -0.63
SSBP1-209ENST00000473783 WNT1P04628 370 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 ITGB2P05107 769 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 KRT19P08727 400 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 ZDHHC11BP0C7U3 371 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 CD38P28907 300 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 CACNA2D1P54289 1103 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 RBP5P82980 135 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 GTF2BQ00403 316 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 LINC00303Q3SY05 128 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 TTC31Q49AM3 519 aaPredicted RBP11.1□□□□□ -0.63
SSBP1-209ENST00000473783 MDH1BQ5I0G3 518 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 HYIQ5T013 277 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 HS2ST1Q7LGA3 356 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 KANSL1Q7Z3B3 1105 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 ANKS1BQ7Z6G8 1248 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 CSGALNACT2Q8N6G5 542 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 BHMTQ93088 406 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 ARHGAP9Q9BRR9 750 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 MMTAG2Q9BU76 263 aaKnown RBP11.1□□□□□ -0.63
SSBP1-209ENST00000473783 ERVMER34-1Q9H9K5 563 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 ELOVL2Q9NXB9 296 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 PLK2Q9NYY3 685 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 HSPBP1Q9NZL4 362 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 CHORDC1Q9UHD1 332 aaPredicted RBP11.1□□□□□ -0.63
SSBP1-209ENST00000473783 ITPR3Q14573 2671 aa11.1□□□□□ -0.63
SSBP1-209ENST00000473783 NPHP3-ACAD11A0A0J9YXS1 232 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 FAM92AA1XBS5 289 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 TISP43B9A030 160 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 TLR5O60602 858 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 DNTTP04053 509 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 PDGFRBP09619 1106 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 WARSP23381 471 aaKnown RBP11.09□□□□□ -0.63
SSBP1-209ENST00000473783 RBMS1P29558 406 aaKnown RBP11.09□□□□□ -0.63
SSBP1-209ENST00000473783 AFMP43652 599 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 TRAPPC10P48553 1259 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 ZNF131P52739 623 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 FOSBP53539 338 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 BNIP3Q12983 259 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 POSTNQ15063 836 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 MYCT1Q8N699 235 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 RBBP8NLQ8NC74 664 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-209ENST00000473783 POMGNT1Q8WZA1 660 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-209ENST00000473783 REEP2Q9BRK0 252 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 KLF16Q9BXK1 252 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-209ENST00000473783 ZNF518BQ9C0D4 1074 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 PARVGQ9HBI0 331 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 AASDHPPTQ9NRN7 309 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 IL37Q9NZH6 218 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 TJP2Q9UDY2 1190 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
SSBP1-209ENST00000473783 R3HCC1Q9Y3T6 440 aaKnown RBP11.09□□□□□ -0.63
SSBP1-209ENST00000473783 RP1L1Q8IWN7 2480 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-209ENST00000473783 A0A1W2PR77 199 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 TIMM44O43615 452 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 LZTS3O60299 673 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-209ENST00000473783 OPA1O60313 960 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 CSO75390 466 aaKnown RBP11.08□□□□□ -0.64
SSBP1-209ENST00000473783 FAM13AO94988 1023 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 PLA2G4BP0C869 781 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 WNT7BP56706 349 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 NXPH1P58417 271 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 DAB2P98082 770 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 ARID5AQ03989 594 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 ARSHQ5FYA8 562 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 FYB2Q5VWT5 728 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 SCARA3Q6AZY7 606 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 Q6ZNB5 142 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 PIWIL1Q96J94 861 aaKnown RBP11.08□□□□□ -0.64
SSBP1-209ENST00000473783 SLC46A1Q96NT5 459 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 CIPCQ9C0C6 399 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 COMMD8Q9NX08 183 aa11.08□□□□□ -0.64
SSBP1-209ENST00000473783 TDRD6O60522 2096 aaKnown RBP11.08□□□□□ -0.64
SSBP1-209ENST00000473783 FBN2P35556 2912 aa11.07□□□□□ -0.64
SSBP1-209ENST00000473783 POLQO75417 2590 aa11.07□□□□□ -0.64
SSBP1-209ENST00000473783 EPB41L2O43491 1005 aaKnown RBP11.07□□□□□ -0.64
SSBP1-209ENST00000473783 SIGLEC6O43699 453 aa11.07□□□□□ -0.64
SSBP1-209ENST00000473783 PPFIA2O75334 1257 aa11.07□□□□□ -0.64
SSBP1-209ENST00000473783 ATP5C1P36542 298 aaKnown RBP11.07□□□□□ -0.64
SSBP1-209ENST00000473783 MLLT3P42568 568 aaPredicted RBP11.07□□□□□ -0.64
SSBP1-209ENST00000473783 SLC5A3P53794 718 aa11.07□□□□□ -0.64
SSBP1-209ENST00000473783 RPS14P62263 151 aaKnown RBP11.07□□□□□ -0.64
SSBP1-209ENST00000473783 CLN3Q13286 438 aa11.07□□□□□ -0.64
SSBP1-209ENST00000473783 ZNF211Q13398 564 aaPredicted RBP11.07□□□□□ -0.64
SSBP1-209ENST00000473783 ZRSR1Q15695 479 aaKnown RBP11.07□□□□□ -0.64
SSBP1-209ENST00000473783 ZSCAN23Q3MJ62 389 aa11.07□□□□□ -0.64
SSBP1-209ENST00000473783 SLC45A4Q5BKX6 768 aa11.07□□□□□ -0.64
SSBP1-209ENST00000473783 USP30Q70CQ3 517 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms