RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CDK5R2Q13319 367 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 SF3B4Q15427 424 aaKnown RBP eCLIP5.32□□□□□ -1.567e-10■■■■■ 36.2
TMEM39A-206ENST00000473684 NFE2Q16621 373 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MMEL1Q495T6 779 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 LMBRD2Q68DH5 695 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 ZNF449Q6P9G9 518 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 THNSL2Q86YJ6 484 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 VPS52Q8N1B4 723 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MINDY2Q8NBR6 621 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 NPLOC4Q8TAT6 608 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 PLEKHA8Q96JA3 519 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 NUP85Q9BW27 656 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MRPL1Q9BYD6 325 aaKnown RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 NCKIPSDQ9NZQ3 722 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 DBF4Q9UBU7 674 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 PCDHGB3Q9Y5G1 929 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 CEPT1Q9Y6K0 416 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 ADAMTS7Q9UKP4 1686 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 TMEM120BA0PK00 339 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 GOLGA8IPA6NC78 632 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 ZSCAN5BA6NJL1 495 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 RSPH10B2B2RC85 870 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 H3BNX3 289 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 M0QX08 132 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 KPNA4O00629 521 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 RASGRF2O14827 1237 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 GYG2O15488 501 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 PRODHO43272 600 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 DAPK3O43293 454 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 BUD23O43709 281 aaKnown RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 ITM2AO43736 263 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 PEX1O43933 1283 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 EXOC3O60645 756 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MAGEC1O60732 1142 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 SULT1C4O75897 302 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 STAMBPO95630 424 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 RSPH10BP0C881 870 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 SRGNP10124 158 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 BMP3P12645 472 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 CD9P21926 228 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MAGEA1P43355 309 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 GNG2P59768 71 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 PPP2R2BQ00005 443 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 LRRC63Q05C16 580 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 STK4Q13043 487 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 PAK1Q13153 545 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MOGSQ13724 837 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 PDE1CQ14123 709 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MBTPS1Q14703 1052 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 STILQ15468 1287 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 KLHL38Q2WGJ6 581 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 GALNT7Q86SF2 657 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 CARNMT1Q8N4J0 409 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 METTL25Q8N6Q8 603 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 ADCY4Q8NFM4 1077 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 PPP4R1Q8TF05 950 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 ESR2Q92731 530 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 NEUROD6Q96NK8 337 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MRPL9Q9BYD2 267 aaKnown RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MRPL4Q9BYD3 311 aaKnown RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 EPB41L4BQ9H329 900 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 SERHL2Q9H4I8 314 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 FANCEQ9HB96 536 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 CGGBP1Q9UFW8 167 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 ZFP69BQ9UJL9 534 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 CTNND2Q9UQB3 1225 aa5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 MYO5AQ9Y4I1 1855 aaKnown RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 DICER1Q9UPY3 1922 aaKnown RBP5.32□□□□□ -1.56
TMEM39A-206ENST00000473684 DNAJC25-GNG10A0A024R161 153 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 A0A087X0B3 334 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 RBAK-RBAKDNI3L0D1 243 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PGRMC1O00264 195 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 NOP56O00567 594 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 DENRO43583 198 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CIB2O75838 187 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 DDHD2O94830 711 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 APBA3O96018 575 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CD48P09326 243 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ALOX5P09917 674 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ALAS1P13196 640 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CFL1P23528 166 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 TBXAS1P24557 533 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 MAP4P27816 1152 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 RCVRNP35243 200 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ADCY8P40145 1251 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SUMO1P63165 101 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 DLG4P78352 724 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ADAM17P78536 824 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 IL9RQ01113 521 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 THOC5Q13769 683 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 APOFQ13790 326 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 TIGD2Q4W5G0 525 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 DCAF6Q58WW2 860 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 FAM122CQ6P4D5 195 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 NSMFQ6X4W1 530 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 RGS9BPQ6ZS82 235 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 RNF169Q8NCN4 708 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SYTL5Q8TDW5 730 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 MAML1Q92585 1016 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ASIC4Q96FT7 647 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms