RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 HDAC5Q9UQL6 1122 aa7.55□□□□□ -1.2
SCAF4-205ENST00000472318 PCDHGA2Q9Y5H1 932 aa7.55□□□□□ -1.2
SCAF4-205ENST00000472318 TENM4Q6N022 2769 aa7.55□□□□□ -1.2
SCAF4-205ENST00000472318 CELSR3Q9NYQ7 3312 aa7.55□□□□□ -1.2
SCAF4-205ENST00000472318 ZBED9Q6R2W3 1325 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 ITIH6Q6UXX5 1313 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 FANCMQ8IYD8 2048 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 CNOT1A5YKK6 2376 aaKnown RBP7.54□□□□□ -1.2
SCAF4-205ENST00000472318 PRAMEF25A6NGN4 478 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 K7ENM7 598 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 TBC1D4O60343 1298 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 PLA2G6O60733 806 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 PRKD3O94806 890 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 MPIG6BO95866 241 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 SMIM10L2AP0DMW4 78 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 SMIM10L2BP0DMW5 78 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 MC4RP32245 332 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 RAC3P60763 192 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 CSTF1Q05048 431 aaKnown RBP7.54□□□□□ -1.2
SCAF4-205ENST00000472318 FAPQ12884 760 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 LPAL2Q16609 132 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 RNF151Q2KHN1 245 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 TRIM61Q5EBN2 209 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 ZMAT1Q5H9K5 638 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 SPDYAQ5MJ70 313 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 RNF207Q6ZRF8 634 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 CATIPQ7Z7H3 387 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 NOSTRINQ8IVI9 506 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 CBARPQ8N350 705 aaPredicted RBP7.54□□□□□ -1.2
SCAF4-205ENST00000472318 PPTC7Q8NI37 304 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 NELL1Q92832 810 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 HSPBAP1Q96EW2 488 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 TCF25Q9BQ70 676 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 C16orf70Q9BSU1 422 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 ZNF747Q9BV97 191 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 ZDHHC5Q9C0B5 715 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 GMEB2Q9UKD1 530 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 FBXO4Q9UKT5 387 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 OAZ3Q9UMX2 235 aa7.54□□□□□ -1.2
SCAF4-205ENST00000472318 ZFR2Q9UPR6 939 aaKnown RBP7.54□□□□□ -1.2
SCAF4-205ENST00000472318 GREB1LQ9C091 1923 aaPredicted RBP7.53□□□□□ -1.2
SCAF4-205ENST00000472318 FAM170AA1A519 330 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 A6NCN8 305 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 TLR5O60602 858 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 PRDM1O75626 825 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 TTLL1O95922 423 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 JMJD7P0C870 316 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 SLC1A4P43007 532 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 RXRGP48443 463 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 DNM2P50570 870 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 MGAT3Q09327 533 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 SART3Q15020 963 aaKnown RBP7.53□□□□□ -1.2
SCAF4-205ENST00000472318 SEC23AQ15436 765 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 CCDC6Q16204 474 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 WDR72Q3MJ13 1102 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 HSDL1Q3SXM5 330 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 ATP13A4Q4VNC1 1196 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 PRR16Q569H4 304 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 ATAT1Q5SQI0 421 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 TSSK4Q6SA08 328 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 CHST15Q7LFX5 561 aaPredicted RBP7.53□□□□□ -1.2
SCAF4-205ENST00000472318 TAX1BP1Q86VP1 789 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 CHCHD4Q8N4Q1 142 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 BBC3Q96PG8 261 aaPredicted RBP7.53□□□□□ -1.2
SCAF4-205ENST00000472318 RANBP17Q9H2T7 1088 aaKnown RBP7.53□□□□□ -1.2
SCAF4-205ENST00000472318 AGO3Q9H9G7 860 aaKnown RBP7.53□□□□□ -1.2
SCAF4-205ENST00000472318 ENTPD7Q9NQZ7 604 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 SEMA4GQ9NTN9 838 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 SETD4Q9NVD3 440 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 ZSCAN32Q9NX65 697 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 NDOR1Q9UHB4 597 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 SYNPO2Q9UMS6 1093 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 TTLL3Q9Y4R7 772 aa7.53□□□□□ -1.2
SCAF4-205ENST00000472318 CACNA1IQ9P0X4 2223 aa7.52□□□□□ -1.2
SCAF4-205ENST00000472318 K7ESF4 209 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 KCNK3O14649 394 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 N4BP1O75113 896 aaKnown RBP7.52□□□□□ -1.21
SCAF4-205ENST00000472318 TOP3BO95985 862 aaKnown RBP7.52□□□□□ -1.21
SCAF4-205ENST00000472318 MT-CO1P00395 513 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 FSHBP01225 129 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 FAM200BP0CF97 657 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 RHCEP18577 417 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 IGFALSP35858 605 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 ATP8B2P98198 1209 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 RHDQ02161 417 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 NFYCQ13952 458 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 ZNF460Q14592 562 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 HS1BP3Q53T59 392 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 SPOUT1Q5T280 376 aaKnown RBP7.52□□□□□ -1.21
SCAF4-205ENST00000472318 C1orf122Q6ZSJ8 110 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 BRAPQ7Z569 592 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 THNSL1Q8IYQ7 743 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 SLC44A3Q8N4M1 653 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 CISD2Q8N5K1 135 aaKnown RBP7.52□□□□□ -1.21
SCAF4-205ENST00000472318 KIAA1958Q8N8K9 716 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 COLGALT1Q8NBJ5 622 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 SLC7A14Q8TBB6 771 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 RSPH1Q8WYR4 309 aa7.52□□□□□ -1.21
SCAF4-205ENST00000472318 MRPS27Q92552 414 aaKnown RBP7.52□□□□□ -1.21
SCAF4-205ENST00000472318 CCDC138Q96M89 665 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms